RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 UNC5CLQ8IV45 518 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 CCDC28AQ8IWP9 274 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 C16orf71Q8IYS4 520 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 OR2C3Q8N628 320 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 HIC2Q96JB3 615 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 RIPOR3Q96MK2 946 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 WDR24Q96S15 920 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 PLEKHF1Q96S99 279 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 FAM118BQ9BPY3 351 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 EFHD1Q9BUP0 239 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 PRSS22Q9GZN4 317 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 PCDHAC1Q9H158 963 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF70Q9UC06 446 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 ZMYND8Q9ULU4 1186 aaPredicted RBP4.74□□□□□ -1.65
COL9A1-206ENST00000470652 BTBD3Q9Y2F9 522 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 SBF2Q86WG5 1849 aa4.74□□□□□ -1.65
COL9A1-206ENST00000470652 SPATA31A1Q5TZJ5 1347 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SPATA31A5Q5VU36 1347 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SPATA31A7Q8IWB4 1347 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SIPA1L3O60292 1781 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 RGS12O14924 1447 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CRB1P82279 1406 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 ABCC6O95255 1503 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SMIM35A0A1B0GVV1 85 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CCER2I3L3R5 266 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 DSCR3O14972 297 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 ZSCAN9O15535 394 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CA12O43570 354 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 TMIGD3P0DMS9 266 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 EGR1P18146 543 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 ITGB6P18564 788 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 KCNJ12Q14500 433 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF268Q14587 947 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 WDR43Q15061 677 aaKnown RBP eCLIP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 MAPKAPK3Q16644 382 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SLC5A9Q2M3M2 681 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 AASDHQ4L235 1098 aaPredicted RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 IZUMO3Q5VZ72 239 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 RAP1GAP2Q684P5 730 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SMG7Q92540 1137 aaKnown RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 KAZALD1Q96I82 304 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 TNIP3Q96KP6 325 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CCDC138Q96M89 665 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CFAP53Q96M91 514 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 MYD88Q99836 296 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 GDF15Q99988 308 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 C1QTNF7Q9BXJ2 289 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 ADGRE3Q9BY15 652 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 PDGFCQ9NRA1 345 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 VPS45Q9NRW7 570 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 RXFP3Q9NSD7 469 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 SCAF8Q9UPN6 1271 aaKnown RBP4.73□□□□□ -1.65
COL9A1-206ENST00000470652 CEP83Q9Y592 693 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 KDRP35968 1356 aa4.73□□□□□ -1.65
COL9A1-206ENST00000470652 OVOS2A0A0G2JMS6 1433 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 KDM6AO15550 1401 aaPredicted RBP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 OR2W5A6NFC9 320 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 HNRNPDLO14979 420 aaKnown RBP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 NCK2O43639 380 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 NDST3O95803 873 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 VIPP01282 170 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 HARSP12081 509 aaKnown RBP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 PBX1P40424 430 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF81P51508 661 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 JAK3P52333 1124 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 PMS2P11Q13670 270 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 ATP1A4Q13733 1029 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 KRT24Q2M2I5 525 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 IL31Q6EBC2 164 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 MCM10Q7L590 875 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 CNGA4Q8IV77 575 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 TCP11L2Q8N4U5 519 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 GLIS1Q8NBF1 620 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 OSR1Q8TAX0 266 aaPredicted RBP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 PARD3BQ8TEW8 1205 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF566Q969W8 418 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 GRAMD1AQ96CP6 724 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 NUDT22Q9BRQ3 303 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.72□□□□□ -1.65
COL9A1-206ENST00000470652 MIS18AQ9NYP9 233 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 RGL1Q9NZL6 768 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 SEMA5BQ9P283 1151 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 C5P01031 1676 aa4.72□□□□□ -1.65
COL9A1-206ENST00000470652 KIF24Q5T7B8 1368 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.71□□□□□ -1.66
COL9A1-206ENST00000470652 FAM234BA2RU67 622 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 KCNU1A8MYU2 1149 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 FCHO1O14526 889 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 PRAMEF2O60811 474 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 BCAR3O75815 825 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 ATP5F1P24539 256 aaPredicted RBP4.71□□□□□ -1.66
COL9A1-206ENST00000470652 EEF1GP26641 437 aaKnown RBP4.71□□□□□ -1.66
COL9A1-206ENST00000470652 GALNSP34059 522 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 ARHGAP25P42331 645 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 NEK3P51956 506 aa4.71□□□□□ -1.66
COL9A1-206ENST00000470652 NSUN2Q08J23 767 aaKnown RBP eCLIP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms