RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CCDC70Q6NSX1 233 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CCDC149Q6ZUS6 474 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 DENND5BQ6ZUT9 1274 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TAS1R1Q7RTX1 841 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PHLDB2Q86SQ0 1253 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TADA2BQ86TJ2 420 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CTAGE6Q86UF2 777 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ITIH5Q86UX2 942 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 MON1AQ86VX9 555 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 VSIG1Q86XK7 387 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PSTKQ8IV42 348 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CTAGE4Q8IX94 777 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TCEAL8Q8IYN2 117 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 KATNAL2Q8IYT4 538 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 RCOR2Q8IZ40 523 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ATAD1Q8NBU5 361 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 EXD1Q8NHP7 514 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 JOSD2Q8TAC2 188 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TEKT4Q8WW24 435 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 RXFP2Q8WXD0 754 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CD101Q93033 1021 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 RBM41Q96IZ5 413 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 B3GALT6Q96L58 329 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PGLYRP2Q96PD5 576 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SLITRK1Q96PX8 696 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 KCNK16Q96T55 309 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SEPT5Q99719 369 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CLSTN3Q9BQT9 956 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 VN1R3Q9BXE9 311 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ULBP1Q9BZM6 244 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 LMAN2LQ9H0V9 348 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PRDM16Q9HAZ2 1276 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ENTPD7Q9NQZ7 604 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TLR9Q9NR96 1032 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 OLA1Q9NTK5 396 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CLDND1Q9NY35 253 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 IL37Q9NZH6 218 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 UXTQ9UBK9 157 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CHORDC1Q9UHD1 332 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TTC7AQ9ULT0 858 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ASB3Q9Y575 518 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 FAM186AA6NE01 2351 aa6.9□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF292O60281 2723 aa6.9□□□□□ -1.31
VAMP3-202ENST00000470357 GOLGA6L10A0A0M3HER8 536 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 FAM92AA1XBS5 289 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF487B1APH4 448 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 LOC730098B7Z3J9 87 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 C9orf172C9J069 976 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 PROB1E7EW31 1015 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CCDC188H7C350 402 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 FANCGO15287 622 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 GRM6O15303 877 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 LINC01565O15544 149 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 NCK2O43639 380 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CEP104O60308 925 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 LRCH4O75427 683 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ENDOD1O94919 500 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CXCL14O95715 111 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 USP17L7P0C7H9 530 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RALAP11233 206 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 GBP1P32455 592 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RDXP35241 583 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 FLT3P36888 993 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 GATA4P43694 442 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 PEX5P50542 639 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 KPNA1P52294 538 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 EPHB3P54753 998 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 VCPP55072 806 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 YWHAGP61981 247 aaKnown RBP eCLIP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ZXDAP98168 799 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 DUSP4Q13115 394 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 SMAD4Q13485 552 aaKnown RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CCDC142Q17RM4 750 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 DCAF6Q58WW2 860 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 BSPRYQ5W0U4 402 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF572Q7Z3I7 529 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-202ENST00000470357 MAP7D3Q8IWC1 876 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 DEFB106AQ8N104 65 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ELMOD1Q8N336 334 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RASGEF1CQ8N431 466 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF276Q8N554 614 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 EMC1Q8N766 993 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 ACTRT1Q8TDG2 376 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 RNF139Q8WU17 664 aa6.89□□□□□ -1.31
VAMP3-202ENST00000470357 FAM172AQ8WUF8 416 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms