RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PRMT1Q99873 361 aaKnown RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 CD93Q9NPY3 652 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 NOCTQ9UK39 431 aaKnown RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 DCDC2BA2VCK2 349 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 LRRC10BA6NIK2 292 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 KHNYNO15037 678 aaKnown RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 MMEP08473 750 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 SOX5P35711 763 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 COPAP53621 1224 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 NME3Q13232 169 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 MTA1Q13330 715 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 STPG1Q5TH74 334 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 XYLT1Q86Y38 959 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 SYT12Q8IV01 421 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 AOPEPQ8N6M6 819 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 OR2T3Q8NH03 318 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 PRCCQ92733 491 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 SIPA1Q96FS4 1042 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 PCMTD1Q96MG8 357 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 SPAG5Q96R06 1193 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 NPY6RQ99463 290 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 EDEM2Q9BV94 578 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 NAT10Q9H0A0 1025 aaKnown RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 HSD3B7Q9H2F3 369 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 ITM2CQ9NQX7 267 aa18.9■□□□□ 0.62
PHGDH-204ENST00000469443 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 USP36Q9P275 1121 aaKnown RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 EVLQ9UI08 416 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 INTS6Q9UL03 887 aaKnown RBP18.9■□□□□ 0.62
PHGDH-204ENST00000469443 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 PATE3B3GLJ2 98 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 H0Y626 953 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 M0QYT0 321 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 NDUFS2O75306 463 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ASLP04424 464 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ITPKAP23677 461 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 CSKP41240 450 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 STAT1P42224 750 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 RNASE9P60153 205 aaKnown RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 CDR2Q01850 454 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 UBXN1Q04323 297 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ZNF33AQ06730 810 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 FSCBQ5H9T9 825 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 RABGAP1LQ5R372 815 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 FAM102AQ5T9C2 384 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 TTC39BQ5VTQ0 682 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 OTUD1Q5VV17 481 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 PEAR1Q5VY43 1037 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 NAA35Q5VZE5 725 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 IL31Q6EBC2 164 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 DEFB119Q8N690 84 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ZNF366Q8N895 744 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 NEK11Q8NG66 645 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 SLC20A1Q8WUM9 679 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ERGIC2Q96RQ1 377 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 FBRSQ9HAH7 460 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 TMEM74BQ9NUR3 256 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 KIAA1522Q9P206 1035 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-204ENST00000469443 PILRBQ9UKJ0 227 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 STAP1Q9ULZ2 295 aa18.89■□□□□ 0.61
PHGDH-204ENST00000469443 ASCC3Q8N3C0 2202 aaKnown RBP18.88■□□□□ 0.61
PHGDH-204ENST00000469443 LNP1A1A4G5 178 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 MOCS3O95396 460 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 CD6P30203 668 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 HOXD12P35452 270 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 FMO1Q01740 532 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 ANO6Q4KMQ2 910 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 PITRM1Q5JRX3 1037 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 CAVIN1Q6NZI2 390 aaKnown RBP18.88■□□□□ 0.61
PHGDH-204ENST00000469443 MMS22LQ6ZRQ5 1243 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 SLC41A1Q8IVJ1 513 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 CPA5Q8WXQ8 436 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 NT5C3BQ969T7 300 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 PGAP3Q96FM1 320 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-204ENST00000469443 MYO19Q96H55 970 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 ADAM33Q9BZ11 813 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 PIGVQ9NUD9 493 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-204ENST00000469443 SUN2Q9UH99 717 aa18.88■□□□□ 0.61
PHGDH-204ENST00000469443 A0A1B0GVM2 712 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 MED19A0JLT2 244 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 FAM170AA1A519 330 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 TCAF2A6NFQ2 919 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 GOLGA8SH3BPF8 625 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 IGLV3-19P01714 112 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 CYP1A1P04798 512 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 C7P10643 843 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 ACADMP11310 421 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 CHRNB2P17787 502 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 OXTRP30559 389 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 CXCR3P49682 368 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 SULT1E1P49888 294 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 TPMTP51580 245 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 ST8SIA6P61647 398 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 IRX4P78413 519 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 SLC12A1Q13621 1099 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 AUHQ13825 339 aaKnown RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 PLEKHG6Q3KR16 790 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 SLC25A52Q3SY17 297 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms