RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 COL6A2P12110 1019 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CA4P22748 312 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DCKP27707 260 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 IL12AP29459 219 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 IFNA8P32881 189 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 HOXD13P35453 343 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GNL1P36915 607 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 IGHMBP2P38935 993 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 STAT1P42224 750 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SLCO1A2P46721 670 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SOX9P48436 509 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ENTPD1P49961 510 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CCR3P51677 355 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 IST1P53990 364 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 AQP4P55087 323 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SRP54P61011 504 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ASIC1P78348 528 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 S100A12P80511 92 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PRKCQQ04759 706 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PPATQ06203 517 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 COX10Q12887 443 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DLG1Q12959 904 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ATP1A4Q13733 1029 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GCKRQ14397 625 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TSC22D1Q15714 1073 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LONRF1Q17RB8 773 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 C5orf22Q49AR2 442 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CERKLQ49MI3 558 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 AASDHQ4L235 1098 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TMTC4Q5T4D3 741 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 KRT39Q6A163 491 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 KRT80Q6KB66 452 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GADL1Q6ZQY3 521 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 MFSD6Q6ZSS7 791 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 FAM47EQ6ZV65 393 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 USP49Q70CQ1 688 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SV2BQ7L1I2 683 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 EEPD1Q7L9B9 569 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CHST3Q7LGC8 479 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 FRMD5Q7Z6J6 570 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 C14orf80Q86SX3 495 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SETD3Q86TU7 594 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 VSIG10LQ86VR7 867 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 THNSL2Q86YJ6 484 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LACC1Q8IV20 430 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TRIM59Q8IWR1 403 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CLYBLQ8N0X4 340 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PQLC1Q8N2U9 271 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CARNMT1Q8N4J0 409 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PACRGLQ8N7B6 248 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CELF2-AS1Q8N7Q2 184 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SNX31Q8N9S9 440 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 RNF169Q8NCN4 708 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 BEST2Q8NFU1 509 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 STON2Q8WXE9 905 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TOP1MTQ969P6 601 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TAMM41Q96BW9 452 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ANAPC16Q96DE5 110 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PGBD4Q96DM1 585 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 WDR89Q96FK6 387 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 RMND5BQ96G75 393 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TXNDC15Q96J42 360 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DNAJC1Q96KC8 554 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PANX3Q96QZ0 392 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CDRT15Q96T59 188 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TRIM51Q9BSJ1 452 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LSM14BQ9BX40 385 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GON7Q9BXV9 100 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF341Q9BYN7 854 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CELF4Q9BZC1 486 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 RSPH9Q9H1X1 276 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SMARCAD1Q9H4L7 1026 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DHX33Q9H6R0 707 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TCF7L2Q9NQB0 619 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SLC38A7Q9NVC3 462 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ARL8BQ9NVJ2 186 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 RIC8BQ9NVN3 520 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 NCKIPSDQ9NZQ3 722 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 KCNN3Q9UGI6 736 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ZC3H7BQ9UGR2 993 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SLC7A8Q9UHI5 535 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 XPO7Q9UIA9 1087 aaKnown RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 NUP50Q9UKX7 468 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DNAJC16Q9Y2G8 782 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TACC3Q9Y6A5 838 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TIAM2Q8IVF5 1701 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 HEG1Q9ULI3 1381 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ASTN2O75129 1339 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 NFASCO94856 1347 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 TECPR2O15040 1411 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 EXOC1LA0A1B0GW35 172 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GSTTP1A0A1W2PQM5 241 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 MAGEB16A2A368 324 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PABPN1LA6NDY0 278 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SAGE2PA6NJ88 616 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms