RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 MTA1Q13330 715 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PLEKHG6Q3KR16 790 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 FSCBQ5H9T9 825 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 N4BP2L1Q5TBK1 243 aaPredicted RBP7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 SH3PXD2AQ5TCZ1 1133 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PEAR1Q5VY43 1037 aaPredicted RBP7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 RNF219Q5W0B1 726 aaPredicted RBP7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PSAPL1Q6NUJ1 521 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 DPY19L2P1Q6NXN4 242 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 SASS6Q6UVJ0 657 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 MMS22LQ6ZRQ5 1243 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 FAM183BPQ6ZVS7 135 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 FAM124AQ86V42 546 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 ERICH1Q86X53 443 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 ZDHHC17Q8IUH5 632 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 HDDC3Q8N4P3 179 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 TMEM35BQ8NCS4 154 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 CADM4Q8NFZ8 388 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 TTC17Q96AE7 1141 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 MYEOVQ96EZ4 313 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PRICKLE1Q96MT3 831 aaPredicted RBP7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 SLC2A13Q96QE2 648 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 STK33Q9BYT3 514 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 MIR1-1HGQ9H1L0 117 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 VPS16Q9H269 839 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 FBRSQ9HAH7 460 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PLCB1Q9NQ66 1216 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PRSS16Q9NQE7 514 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 TAB2Q9NYJ8 693 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 FHOD1Q9Y613 1164 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 PI4KAP42356 2102 aa7.43□□□□□ -1.22
SNRPD3-205ENST00000468770 METTL12A8MUP2 240 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 M0QYT0 321 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ARHGAP33O14559 1287 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 OPHN1O60890 802 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 RNASEH1O60930 286 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 IGLV3-19P01714 112 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 DNTTP04053 509 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 CEACAM1P13688 526 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 CSRP1P21291 193 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 NOS2P35228 1153 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 NNMTP40261 264 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 MATKP42679 507 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 OXCT1P55809 520 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 RPS14P62263 151 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ECT2LQ008S8 904 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ZBTB16Q05516 673 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 EIF4EBP2Q13542 120 aaPredicted RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 SLC12A1Q13621 1099 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 TTC31Q49AM3 519 aaPredicted RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 PTPN20Q4JDL3 420 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 PITRM1Q5JRX3 1037 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 RABGAP1LQ5R372 815 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 FKBP15Q5T1M5 1219 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 TTC39BQ5VTQ0 682 aaPredicted RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 DCAF12L1Q5VU92 463 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 TAF3Q5VWG9 929 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 FBXL22Q6P050 247 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 OLFML1Q6UWY5 402 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 SND1Q7KZF4 910 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 SLC26A9Q7LBE3 791 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 KDM1BQ8NB78 822 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ZNF397Q8NF99 534 aaPredicted RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 GPT2Q8TD30 523 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 GANCQ8TET4 914 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 DNASE2BQ8WZ79 361 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 C18orf8Q96DM3 657 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 LMLNQ96KR4 655 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 RPRD1AQ96P16 312 aaPredicted RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 PPP1R9BQ96SB3 815 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 BTBD1Q9H0C5 482 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 MTG2Q9H4K7 406 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 SLC32A1Q9H598 525 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 WDCPQ9H6R7 721 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 CAPN10Q9HC96 672 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 FSCN3Q9NQT6 498 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ANO10Q9NW15 660 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 FANCLQ9NW38 375 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 RRN3Q9NYV6 651 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 INTS6Q9UL03 887 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 STAP1Q9ULZ2 295 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 ERVW-1Q9UQF0 538 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 NCKAP1Q9Y2A7 1128 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 TPRP12270 2363 aaKnown RBP7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 PLXND1Q9Y4D7 1925 aa7.42□□□□□ -1.22
SNRPD3-205ENST00000468770 CEP192Q8TEP8 1941 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 A0A1B0GTW7 788 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 A0A1B0GVM2 712 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 FAM170AA1A519 330 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 TARSL2A2RTX5 802 aaKnown RBP7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 TCAF2A6NFQ2 919 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 F8VZ95 297 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 GIPC1O14908 333 aa7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 BCAT2O15382 392 aaPredicted RBP7.41□□□□□ -1.22
SNRPD3-205ENST00000468770 SIN3BO75182 1162 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms