RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 RABEPKQ7Z6M1 372 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 XYLT1Q86Y38 959 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 KDM1BQ8NB78 822 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 CPA5Q8WXQ8 436 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 TTC17Q96AE7 1141 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 PGAP3Q96FM1 320 aaPredicted RBP15.11■□□□□ 0.01
COMMD3-206ENST00000468179 SIPA1Q96FS4 1042 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 PRICKLE1Q96MT3 831 aaPredicted RBP15.11■□□□□ 0.01
COMMD3-206ENST00000468179 WDCPQ9H6R7 721 aa15.11■□□□□ 0.01
COMMD3-206ENST00000468179 NOCTQ9UK39 431 aaKnown RBP15.11■□□□□ 0.01
COMMD3-206ENST00000468179 GVINP1Q7Z2Y8 2422 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 IGHV1OR15-9A0A0B4J2B8 117 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 KHNYNO15037 678 aaKnown RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 CYP1A1P04798 512 aaPredicted RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 CD70P32970 193 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 HOXD12P35452 270 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 SULT1E1P49888 294 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 DEUP1Q05D60 604 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 SFSWAPQ12872 951 aaKnown RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 LMAN2Q12907 356 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 RNF219Q5W0B1 726 aaPredicted RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 LYSMD4Q5XG99 296 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 TMPRSS6Q8IU80 811 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 TMEFF1Q8IYR6 380 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 CFAP52Q8N1V2 620 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 OR2T3Q8NH03 318 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 SORCS1Q8WY21 1168 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 FOXJ1Q92949 421 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 NPY6RQ99463 290 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 TMEM245Q9H330 911 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 ITM2CQ9NQX7 267 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 XPO7Q9UIA9 1087 aaKnown RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 MBD1Q9UIS9 605 aaPredicted RBP15.1■□□□□ 0.01
COMMD3-206ENST00000468179 CYP8B1Q9UNU6 501 aa15.1■□□□□ 0.01
COMMD3-206ENST00000468179 A0A1B0GVM2 712 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 TCAF2A6NFQ2 919 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 GOLGA8SH3BPF8 625 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 SLC30A4O14863 429 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 EPHB6O15197 1021 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 SRPRAP08240 638 aaKnown RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 PRKCHP24723 683 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 CD6P30203 668 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 NNMTP40261 264 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 NSFP46459 744 aaKnown RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 CXCR3P49682 368 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 LIMK1P53667 647 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 SULT2A1Q06520 285 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 CAMK2GQ13555 558 aaPredicted RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 SYCP2LQ5T4T6 812 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 PPP1R2P3Q6NXS1 205 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 LRRC31Q6UY01 552 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 SYT12Q8IV01 421 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 DHX40Q8IX18 779 aaKnown RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 CEP76Q8TAP6 659 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 CYB5D2Q8WUJ1 264 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 PIGKQ92643 395 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 NT5C3BQ969T7 300 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 RPRD1AQ96P16 312 aaPredicted RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 PRMT1Q99873 361 aaKnown RBP15.09■□□□□ 0.01
COMMD3-206ENST00000468179 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 MYO6Q9UM54 1294 aa15.09■□□□□ 0.01
COMMD3-206ENST00000468179 USP34Q70CQ2 3546 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 RNASEH1O60930 286 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 CALB1P05937 261 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 ATP1A3P13637 1013 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 FERP16591 822 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 MMP8P22894 467 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 CSKP41240 450 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 FMO1Q01740 532 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 ZNF177Q13360 481 aaPredicted RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 AUHQ13825 339 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 SF3A2Q15428 464 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 CCDC6Q16204 474 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 PTPRNQ16849 979 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 PITRM1Q5JRX3 1037 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 IL31Q6EBC2 164 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 FBXL22Q6P050 247 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 LRSAM1Q6UWE0 723 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 APTXQ7Z2E3 356 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 CCAR2Q8N163 923 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 WFDC5Q8TCV5 224 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 SLC20A1Q8WUM9 679 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 ERLEC1Q96DZ1 483 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 LMLNQ96KR4 655 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 C1orf74Q96LT6 269 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 NUP58Q9BVL2 599 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 NUSAP1Q9BXS6 441 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 MKRN2Q9H000 416 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 TKTL2Q9H0I9 626 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 PIGVQ9NUD9 493 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 ARHGEF38Q9NXL2 777 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 USP36Q9P275 1121 aaKnown RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 EVLQ9UI08 416 aaPredicted RBP15.08■□□□□ 0
COMMD3-206ENST00000468179 TMEM59LQ9UK28 342 aa15.08■□□□□ 0
COMMD3-206ENST00000468179 MYO15AQ9UKN7 3530 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms