RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 RRAGAQ7L523 313 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 CCDC117Q8IWD4 279 aaPredicted RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 CARNMT1Q8N4J0 409 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 DQX1Q8TE96 717 aaKnown RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 TTC17Q96AE7 1141 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 LMLNQ96KR4 655 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 FCRL2Q96LA5 508 aaPredicted RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 TIGD1Q96MW7 591 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 RSPH9Q9H1X1 276 aaPredicted RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 KIAA1522Q9P206 1035 aaPredicted RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 NCKAP1Q9Y2A7 1128 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 BTBD3Q9Y2F9 522 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 GPSM3Q9Y4H4 160 aa17.91■□□□□ 0.46
TRIM56-203ENST00000467847 GOLGA4Q13439 2230 aaKnown RBP17.91■□□□□ 0.46
TRIM56-203ENST00000467847 PLXNA2O75051 1894 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 P4HA2O15460 535 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 RNASEH1O60930 286 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ASLP04424 464 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 FYNP06241 537 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ATXN1LP0C7T5 689 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 CD44P16070 742 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 CSKP41240 450 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 RPS24P62847 133 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 GCNT1Q02742 428 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 CDH18Q13634 790 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 COL28A1Q2UY09 1125 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ADAT2Q7Z6V5 191 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ARHGEF19Q8IW93 802 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 LMO3Q8TAP4 145 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ADAM32Q8TC27 787 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 IGSF8Q969P0 613 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 MYEOVQ96EZ4 313 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 MYO19Q96H55 970 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 PABPC3Q9H361 631 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 CCDC86Q9H6F5 360 aaKnown RBP17.9■□□□□ 0.46
TRIM56-203ENST00000467847 ST7Q9NRC1 585 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 TOR4AQ9NXH8 423 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 SCML1Q9UN30 329 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 NAALADL1Q9UQQ1 740 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 APC2O95996 2303 aa17.9■□□□□ 0.46
TRIM56-203ENST00000467847 NYNRINQ9P2P1 1898 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 FAM47DPA6NHR8 397 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 GOLGA8CPA6NN73 597 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 KCNK3O14649 394 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 SART1O43290 800 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 SIN3BO75182 1162 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 MOCS2O96007 188 aaPredicted RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 PPP1R2P41236 205 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 NNTQ13423 1086 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 HNRNPA1L2Q32P51 320 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 MS4A13Q5J8X5 152 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 KIAA0895LQ68EN5 471 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 USP30Q70CQ3 517 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 DHX40Q8IX18 779 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 CFAP52Q8N1V2 620 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 FAM149B1Q96BN6 582 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 NUCKS1Q9H1E3 243 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 FBXL12Q9NXK8 326 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 MAN1B1Q9UKM7 699 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 INTS6Q9UL03 887 aaKnown RBP17.89■□□□□ 0.45
TRIM56-203ENST00000467847 CELSR3Q9NYQ7 3312 aa17.89■□□□□ 0.45
TRIM56-203ENST00000467847 ADAMTS20P59510 1910 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 IGHV4-34P06331 123 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 KRT5P13647 590 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 CCT8P50990 548 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 SFSWAPQ12872 951 aaKnown RBP17.88■□□□□ 0.45
TRIM56-203ENST00000467847 FSCBQ5H9T9 825 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 PITRM1Q5JRX3 1037 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 KCNT1Q5JUK3 1230 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 TTI2Q6NXR4 508 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 MMS22LQ6ZRQ5 1243 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 EHBP1Q8NDI1 1231 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 NELFBQ8WX92 580 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 SLC39A13Q96H72 371 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 MRGPRX3Q96LB0 322 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 ORAI3Q9BRQ5 295 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 TRIM62Q9BVG3 475 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 SERGEFQ9UGK8 458 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
TRIM56-203ENST00000467847 BICDL2A1A5D9 508 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 H0Y8X5 98 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 CAPN9O14815 690 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 MID1O15344 667 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 PCDHGA12O60330 932 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 RNASEH2AO75792 299 aaKnown RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 LUC7L3O95232 432 aaKnown RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 MOCS3O95396 460 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 APOEP02649 317 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 CTSOP43234 321 aaPredicted RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 CTSKP43235 329 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 GRK6P43250 576 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 GPD2P43304 727 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 ACADSBP45954 432 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 RPL34P49207 117 aaKnown RBP17.87■□□□□ 0.45
TRIM56-203ENST00000467847 C21orf59P57076 290 aa17.87■□□□□ 0.45
TRIM56-203ENST00000467847 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms