RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NADSYN1Q6IA69 706 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 Q6ZNB5 142 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 FAM71BQ8TC56 605 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SMARCD2Q92925 531 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 OSBPL2Q9H1P3 480 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 LSM7Q9UK45 103 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 VANGL2Q9ULK5 521 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 KIF26AQ9ULI4 1882 aaPredicted RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 TRDMT1O14717 391 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MBTPS2O43462 519 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 NEBLO76041 1014 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 URI1O94763 535 aaPredicted RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 LAMP2P13473 410 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 KRT10P13645 584 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 PRLRP16471 622 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SLC6A4P31645 630 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ARL4AP40617 200 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CDKN2BP42772 138 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 USP4Q13107 963 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SMAD4Q13485 552 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 AUHQ13825 339 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 KAZNQ674X7 775 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RFWD3Q6PCD5 774 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SPOCD1Q6ZMY3 1216 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 HTR3DQ70Z44 454 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CHSY1Q86X52 802 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 DDX42Q86XP3 938 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MAP7D3Q8IWC1 876 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 BBS7Q8IWZ6 715 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RCOR2Q8IZ40 523 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CELF5Q8N6W0 485 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RSPRY1Q96DX4 576 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MS4A14Q96JA4 679 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CAPZA3Q96KX2 299 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 C1orf74Q96LT6 269 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 EPAS1Q99814 870 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 PRMT1Q99873 361 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF670Q9BS34 389 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 HERPUD2Q9BSE4 406 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 DCLK3Q9C098 648 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RMI1Q9H9A7 625 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SMARCAL1Q9NZC9 954 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 PCDHGA4Q9Y5G9 962 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 SHROOM3Q8TF72 1996 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 hCG_1818297A0A087WSY0 165 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 E9PAM4 449 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CEP104O60308 925 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MYBL2P10244 700 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 FCARP24071 287 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 WEE1P30291 646 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 VCPP55072 806 aaKnown RBP7.08□□□□□ -1.28
SCAF4-204ENST00000467731 TPI1P60174 286 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ANKRD20A8PQ5CZ79 823 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ARTNQ5T4W7 220 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MANEALQ5VSG8 457 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 FBXL22Q6P050 247 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 RFX8Q6ZV50 586 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 AZIN2Q96A70 460 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 MYEOVQ96EZ4 313 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 PBKQ96KB5 322 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CSPG4P5Q96PW8 444 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 OSBPL8Q9BZF1 889 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 KIF9Q9HAQ2 790 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 STOML2Q9UJZ1 356 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 NEU3Q9UQ49 428 aa7.08□□□□□ -1.28
SCAF4-204ENST00000467731 CHD5Q8TDI0 1954 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 E2F8A0AVK6 867 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 F5H5T6 163 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 EEF2KO00418 725 aaKnown RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 CES2O00748 559 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 LATS1O95835 1130 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 FGGP02679 453 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TCF3P15923 654 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TACR2P21452 398 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 EPHB2P29323 1055 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 IRAK1P51617 712 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 COPS2P61201 443 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TFF2Q03403 129 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PDCD2Q16342 344 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TANGO2Q6ICL3 276 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 RWDD4Q6NW29 188 aaKnown RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 CREG2Q8IUH2 290 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF683Q8IZ20 524 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 RASGEF1CQ8N431 466 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 MAFAQ8NHW3 353 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PCDH19Q8TAB3 1148 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 FGF14Q92915 247 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 IGSF8Q969P0 613 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 FAF2Q96CS3 445 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TRPV4Q9HBA0 871 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 MPP6Q9NZW5 540 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 RCOR3Q9P2K3 495 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 HEPACAM2A8MVW5 462 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 DAPK3O43293 454 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 CPP00450 1065 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms