RNA–Protein interactions for RNA: ENST00000467301.1

LIMK2-208, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-208ENST00000467301 THAP9Q9H5L6 903 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 C6orf106Q9H6K1 298 aaPredicted RBP14.09□□□□□ -0.15
LIMK2-208ENST00000467301 PLCB1Q9NQ66 1216 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 DDIT4Q9NX09 232 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 SUN2Q9UH99 717 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 SLC12A6Q9UHW9 1150 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
LIMK2-208ENST00000467301 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
LIMK2-208ENST00000467301 CACNA1EQ15878 2313 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 METTL12A8MUP2 240 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 F5H5T6 163 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 BCAT2O15382 392 aaPredicted RBP14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FSBPO95073 299 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 SEMA4FO95754 770 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 ASLP04424 464 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 ACSL1P33121 698 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 KRT9P35527 623 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 CTSOP43234 321 aaPredicted RBP14.08□□□□□ -0.16
LIMK2-208ENST00000467301 CDK17Q00537 523 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 PTK2Q05397 1052 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 NME3Q13232 169 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 MEA1Q16626 185 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 MAN2A1Q16706 1144 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 DPCR1Q3MIW9 517 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FSCBQ5H9T9 825 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FAM183BPQ6ZVS7 135 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 TMEM110Q86TL2 294 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 DEFB106AQ8N104 65 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 ATP6V0D2Q8N8Y2 350 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 SHC3Q92529 594 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 BTN2A3PQ96KV6 586 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 CAMK1GQ96NX5 476 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 CPXM1Q96SM3 734 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 NUP62CLQ9H1M0 184 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FBRSQ9HAH7 460 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 PCDHB9Q9Y5E1 797 aa14.08□□□□□ -0.16
LIMK2-208ENST00000467301 KMT2BQ9UMN6 2715 aaPredicted RBP14.08□□□□□ -0.16
LIMK2-208ENST00000467301 FRYQ5TBA9 3013 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 USP24Q9UPU5 2620 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 GTPBP10A4D1E9 387 aaKnown RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 RNASEH1O60930 286 aaKnown RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 HSF2BPO75031 334 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 SIN3BO75182 1162 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 IGLV3-19P01714 112 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 ABCB4P21439 1286 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 EFHC1Q5JVL4 640 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 PIP4P1Q86T03 277 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 SLC47A2Q86VL8 602 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 BTBD1Q9H0C5 482 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 SIX2Q9NPC8 291 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 DNAAF2Q9NVR5 837 aaKnown RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 KIAA1522Q9P206 1035 aaPredicted RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 INTS6Q9UL03 887 aaKnown RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 ERVW-1Q9UQF0 538 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
LIMK2-208ENST00000467301 TP53BP1Q12888 1972 aaPredicted RBP14.07□□□□□ -0.16
LIMK2-208ENST00000467301 TMEM131Q92545 1883 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 A0A1B0GVT2 93 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 TTC34A8MYJ7 566 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 KCNU1A8MYU2 1149 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 C1QTNF9BB2RNN3 333 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 HYAL3O43820 417 aaPredicted RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 SH3BP5O60239 455 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 CER1O95813 267 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 ERBB2P04626 1255 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 C1QTNF9P0C862 333 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 CD59P13987 128 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 PDGFRAP16234 1089 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 CCR1P32246 355 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 PSMD8P48556 350 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 FAM193AP78312 1265 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 ZBTB16Q05516 673 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 VWA3BQ502W6 1294 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 RABGAP1LQ5R372 815 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 UNQ6494/PRO21346Q6UXR6 183 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 NAXDQ8IW45 347 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 APCDD1Q8J025 514 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 WDTC1Q8N5D0 677 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 SETD7Q8WTS6 366 aaKnown RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 TTC17Q96AE7 1141 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 LMLNQ96KR4 655 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 RPL10LQ96L21 214 aaKnown RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 RPRD1AQ96P16 312 aaPredicted RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 SCNM1Q9BWG6 230 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 ZDHHC5Q9C0B5 715 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 PABPC3Q9H361 631 aaKnown RBP14.06□□□□□ -0.16
LIMK2-208ENST00000467301 NDST4Q9H3R1 872 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 GAREM1Q9H706 876 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
LIMK2-208ENST00000467301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.06□□□□□ -0.161e-7■■□□□ 12.9
LIMK2-208ENST00000467301 FBXL12Q9NXK8 326 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms