RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TTC13Q8NBP0 860 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 GLMNQ92990 594 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 NAT6Q93015 286 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
UBR4-210ENST00000466969 TMEM30AQ9NV96 361 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
UBR4-210ENST00000466969 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 LOXL2Q9Y4K0 774 aa13.19□□□□□ -0.3
UBR4-210ENST00000466969 E9PMD0 336 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 IL18RAPO95256 599 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 ATP5BP06576 529 aaKnown RBP13.18□□□□□ -0.3
UBR4-210ENST00000466969 SETMARQ53H47 684 aaPredicted RBP13.18□□□□□ -0.3
UBR4-210ENST00000466969 TMEM164Q5U3C3 297 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 ADALQ6DHV7 355 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 GPBAR1Q8TDU6 330 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
UBR4-210ENST00000466969 KBTBD7Q8WVZ9 684 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 USP7Q93009 1102 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 TCTN2Q96GX1 697 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 C5orf34Q96MH7 638 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 COMMD8Q9NX08 183 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 SALL4Q9UJQ4 1053 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 CA5BQ9Y2D0 317 aa13.18□□□□□ -0.3
UBR4-210ENST00000466969 PCSK5Q92824 1860 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 WNT7AO00755 349 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 CASC3O15234 703 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 DLDP09622 509 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 NR1D1P20393 614 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 MCM7P33993 719 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 MAPK10P53779 464 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 POU5F1Q01860 360 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 BLOC1S2Q6QNY1 142 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 TP53INP2Q8IXH6 220 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 MTG2Q9H4K7 406 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 CYTH4Q9UIA0 394 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
UBR4-210ENST00000466969 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 MYH11P35749 1972 aa13.17□□□□□ -0.3
UBR4-210ENST00000466969 H3BM21 787 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
UBR4-210ENST00000466969 RNGTTO60942 597 aaKnown RBP13.16□□□□□ -0.3
UBR4-210ENST00000466969 SIN3BO75182 1162 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 STC2O76061 302 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 IGHDP01880 384 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 LIFP15018 202 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
UBR4-210ENST00000466969 NOS2P35228 1153 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 ST8SIA6P61647 398 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 RBP5P82980 135 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 ZNF542PQ5EBM4 170 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 SPNS3Q6ZMD2 512 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 ASB18Q6ZVZ8 466 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 AHI1Q8N157 1196 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 ZNF548Q8NEK5 533 aaPredicted RBP13.16□□□□□ -0.3
UBR4-210ENST00000466969 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 IL12RB2Q99665 862 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 EPAS1Q99814 870 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 CAAP1Q9H8G2 361 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
UBR4-210ENST00000466969 FAM92AA1XBS5 289 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 C9orf172C9J069 976 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 MKRN2OSH3BPM6 223 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 AGRPO00253 132 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 CLDN5O00501 218 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 MDM4O15151 490 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 CAPN5O15484 640 aaPredicted RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 HLA-FP30511 346 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 CCKBRP32239 447 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 PSMD8P48556 350 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
UBR4-210ENST00000466969 DEFB133Q30KQ1 61 aa13.15□□□□□ -0.3
UBR4-210ENST00000466969 MBLAC2Q68D91 279 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms