RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 LRIG2O94898 1065 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 CD48P09326 243 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 GOT1P17174 413 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 HOXC13P31276 330 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 CASQ1P31415 396 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 HCAR3P49019 387 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 VCPP55072 806 aaKnown RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 TPI1P60174 286 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 COPS2P61201 443 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 PDGFRLQ15198 375 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 TAZQ16635 292 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 EML3Q32P44 896 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 RABGAP1LQ5R372 815 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 TTC39BQ5VTQ0 682 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 DCAF12L1Q5VU92 463 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 SPOCD1Q6ZMY3 1216 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 HJURPQ8NCD3 748 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 PBXIP1Q96AQ6 731 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 FAF2Q96CS3 445 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 ASIC4Q96FT7 647 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 RPRD1AQ96P16 312 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 CARD9Q9H257 536 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 CWC15Q9P013 229 aaKnown RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 PPARGC1AQ9UBK2 798 aaKnown RBP13.68□□□□□ -0.22
PDCD11-202ENST00000466959 SNX12Q9UMY4 172 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 NEU3Q9UQ49 428 aa13.68□□□□□ -0.22
PDCD11-202ENST00000466959 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 COL4A3Q01955 1670 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 DRGXA6NNA5 263 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
PDCD11-202ENST00000466959 CHADO15335 359 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 GFRA3O60609 400 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 TSPAN3O60637 253 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 SRGAP2O75044 1071 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PYGMP11217 842 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PTPN7P35236 360 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 CETN2P41208 172 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 CDKN2BP42772 138 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
PDCD11-202ENST00000466959 DPYSQ14117 519 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 GRM2Q14416 872 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PAPD7Q5XG87 772 aaKnown RBP13.67□□□□□ -0.22
PDCD11-202ENST00000466959 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PRSS33Q8NF86 280 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 EDAQ92838 391 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 MYEOVQ96EZ4 313 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 PHOX2BQ99453 314 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 FAM83CQ9BQN1 747 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
PDCD11-202ENST00000466959 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
PDCD11-202ENST00000466959 ZYG11BQ9C0D3 744 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 LINC00597Q9H2U6 94 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 SPHK2Q9NRA0 654 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 STIM2Q9P246 746 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 IGSF9Q9P2J2 1179 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 LIMD1Q9UGP4 676 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 COL4A2P08572 1712 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 MYOFQ9NZM1 2061 aa13.67□□□□□ -0.22
PDCD11-202ENST00000466959 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 CES2O00748 559 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 FGF10O15520 208 aaPredicted RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 DAPK3O43293 454 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 NFATC1O95644 943 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 CYBBP04839 570 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 ARSAP15289 507 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 PRLRP16471 622 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 RHOQP17081 205 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 IL4RP24394 825 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 EPHB2P29323 1055 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 GDI1P31150 447 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 IRAK1P51617 712 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 SGSHP51688 502 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 RPS24P62847 133 aaKnown RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 ANKRD20A8PQ5CZ79 823 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 SEL1L2Q5TEA6 688 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 TRIM68Q6AZZ1 485 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 BMP8AQ7Z5Y6 402 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 IRF7Q92985 503 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 TMA16Q96EY4 203 aaKnown RBP13.66□□□□□ -0.22
PDCD11-202ENST00000466959 ZFYVE19Q96K21 471 aa13.66□□□□□ -0.22
PDCD11-202ENST00000466959 PBKQ96KB5 322 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms