RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 ASB12Q8WXK4 309 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 SMG7Q92540 1137 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 KAT2BQ92831 832 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 GPR78Q96P69 363 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 RPS6KC1Q96S38 1066 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 RMDN3Q96TC7 470 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 KATNAL1Q9BW62 490 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 TM2D2Q9BX73 214 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 KCNK9Q9NPC2 374 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 TRNAU1APQ9NX07 287 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 DACT1Q9NYF0 836 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 HERC5Q9UII4 1024 aaKnown RBP4.48□□□□□ -1.69
CALD1-214ENST00000466704 RAB21Q9UL25 225 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 MAGI2Q86UL8 1455 aa4.48□□□□□ -1.69
CALD1-214ENST00000466704 PCSK5Q92824 1860 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 ABCC1P33527 1531 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 PREX2Q70Z35 1606 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 LOC105369274A0A096LPK9 316 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 LOC102723532A0A0G2JNH3 316 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 M0QYT0 321 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 TRIM38O00635 465 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 NKX2-8O15522 239 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 ALDOAP04075 364 aaKnown RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 RPS6KB1P23443 525 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 GRK5P34947 590 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 IDUAP35475 653 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 CPA2P48052 419 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 PLCD1P51178 756 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 POLE2P56282 527 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALD1-214ENST00000466704 ETFDHQ16134 617 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 PXDC1Q5TGL8 231 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 RBM44Q6ZP01 1051 aaKnown RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 OR4N4Q8N0Y3 316 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 ZNF778Q96MU6 729 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 SIGLEC11Q96RL6 698 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 RTKNQ9BST9 563 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 SCNM1Q9BWG6 230 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 BRD8Q9H0E9 1235 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 VPS16Q9H269 839 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 AGO4Q9HCK5 861 aaKnown RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 IPO11Q9UI26 975 aaKnown RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 TRPC5Q9UL62 973 aaPredicted RBP4.47□□□□□ -1.69
CALD1-214ENST00000466704 B3GNT3Q9Y2A9 372 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 COMMD10Q9Y6G5 202 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 CAMSAP2Q08AD1 1489 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 MBD5Q9P267 1494 aa4.47□□□□□ -1.69
CALD1-214ENST00000466704 EMSYQ7Z589 1322 aa4.46□□□□□ -1.69
CALD1-214ENST00000466704 FGD6Q6ZV73 1430 aa4.46□□□□□ -1.69
CALD1-214ENST00000466704 SYCP2Q9BX26 1530 aa4.46□□□□□ -1.69
CALD1-214ENST00000466704 SUPT6HQ7KZ85 1726 aaKnown RBP4.46□□□□□ -1.69
CALD1-214ENST00000466704 MYO5CQ9NQX4 1742 aa4.46□□□□□ -1.69
CALD1-214ENST00000466704 FRMPD1Q5SYB0 1578 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 SAMD9LQ8IVG5 1584 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 MLH3Q9UHC1 1453 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3DA0A087WVF3 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3IA0A087WXS9 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3KA0A087X1G2 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3BA6NDS4 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3FA6NER0 549 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 C3orf70A6NLC5 250 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 EFCAB8A8MWE9 144 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3LB9A6J9 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 ACKR2O00590 384 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 PPP6R2O75170 966 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 PEX14O75381 377 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 LARGE1O95461 756 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 CSTBP04080 98 aaKnown RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3HP0C7X1 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 AKR1A1P14550 325 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 LMO1P25800 156 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 HOXD9P28356 352 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 SERPINF1P36955 418 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 ZNF84P51523 738 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 CFHR1Q03591 330 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 DMWDQ09019 674 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 C10orf62Q5T681 223 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3GQ6DHY5 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3CQ6IPX1 549 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 SHC4Q6S5L8 630 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 ANKRD13BQ86YJ7 626 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 RFX6Q8HWS3 928 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 RHPN2Q8IUC4 686 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 ADGRF4Q8IZF3 695 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TBC1D3Q8IZP1 549 aaPredicted RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 NANOGP1Q8N7R0 232 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 ADPRHL1Q8NDY3 354 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 RSC1A1Q92681 617 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 EID2BQ96D98 161 aa4.46□□□□□ -1.7
CALD1-214ENST00000466704 TRMT61AQ96FX7 289 aaKnown RBP4.46□□□□□ -1.7
CALD1-214ENST00000466704 P2RY11Q96G91 374 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms