RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PEBP4Q96S96 227 aa14.92□□□□□ -0.02
DNMT3A-208ENST00000466601 RBM12Q9NTZ6 932 aaKnown RBP14.92□□□□□ -0.02
DNMT3A-208ENST00000466601 USP18Q9UMW8 372 aa14.92□□□□□ -0.02
DNMT3A-208ENST00000466601 SLC27A6Q9Y2P4 619 aa14.92□□□□□ -0.02
DNMT3A-208ENST00000466601 IGLV3-10A0A075B6K4 115 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 A0A0A6YYK5 440 aaPredicted RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 A0A1B0GVM2 712 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 RCCD1A6NED2 376 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 TCAF2A6NFQ2 919 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 TMEM110-MUSTN1A8MSY1 372 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 H0Y626 953 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 K7EQS6 105 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 ARHGAP6O43182 974 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 NRDCO43847 1150 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 LUC7L3O95232 432 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 L1CAMP32004 1257 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 SSR1P43307 286 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 IRAK1P51617 712 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 VAV2P52735 878 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 CDH18Q13634 790 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 FBXO43Q4G163 708 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 ARTNQ5T4W7 220 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 KIAA1328Q86T90 577 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 SFTPA1Q8IWL2 248 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 CCAR2Q8N163 923 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 PYROXD2Q8N2H3 581 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 ZNF557Q8N988 423 aaPredicted RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 FIBINQ8TAL6 211 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 WFDC5Q8TCV5 224 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 EZH1Q92800 747 aaPredicted RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 PDLIM2Q96JY6 352 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 DESI2Q9BSY9 194 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 GPATCH2LQ9NWQ4 482 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 PPARGC1AQ9UBK2 798 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 AP4E1Q9UPM8 1137 aa14.91□□□□□ -0.02
DNMT3A-208ENST00000466601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 FAM72CH0Y354 149 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 PJA2O43164 708 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CLDN11O75508 207 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CNTN5O94779 1100 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 LRIG2O94898 1065 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 TCF4P15884 667 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 IL1R2P27930 398 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 HLA-FP30511 346 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 AVPR2P30518 371 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 MAN1A1P33908 653 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 TNFRSF4P43489 277 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 HADHBP55084 474 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CDH4P55283 916 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CCZ1BP86790 482 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CCZ1P86791 482 aaPredicted RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 ZNF177Q13360 481 aaPredicted RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 HADHQ16836 314 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 GEN1Q17RS7 908 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 BOLA3Q53S33 107 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 ALFQ53S48 1182 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 FAM72AQ5TYM5 149 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 MANEALQ5VSG8 457 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 FAM72DQ6L9T8 149 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CYP4V2Q6ZWL3 525 aaPredicted RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CHST9Q7L1S5 443 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 FAM72BQ86X60 149 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 CPNE8Q86YQ8 564 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 PSTKQ8IV42 348 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 SYNPOQ8N3V7 929 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 TMEM105Q8N8V8 129 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 ZYG11BQ9C0D3 744 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 LACRTQ9GZZ8 138 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 DHX35Q9H5Z1 703 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 ZWILCHQ9H900 591 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 ABCB8Q9NUT2 735 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 MPP6Q9NZW5 540 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 DLGAP2Q9P1A6 1054 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 MIA3Q5JRA6 1907 aa14.9□□□□□ -0.02
DNMT3A-208ENST00000466601 TRIOO75962 3097 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 BTNL10A8MVZ5 291 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 PRRT4C9JH25 899 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 CREB3O43889 395 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 RNF40O75150 1001 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 PTMAP06454 111 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 PABPC1P11940 636 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 MAGEA9P43362 315 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 SEC13P55735 322 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 SLC25A11Q02978 314 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 LMAN2Q12907 356 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 CA9Q16790 459 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 FSCBQ5H9T9 825 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 RWDD4Q6NW29 188 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 ANKS1BQ7Z6G8 1248 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 KIAA0907Q7Z7F0 614 aaPredicted RBP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 CCDC26Q8TAB7 109 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 WFIKKN2Q8TEU8 576 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 TBC1D31Q96DN5 1066 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 LMLNQ96KR4 655 aa14.89□□□□□ -0.03
DNMT3A-208ENST00000466601 EPAS1Q99814 870 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms