RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 ARHGAP36Q6ZRI8 547 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 BCL7CQ8WUZ0 217 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 EBNA1BP2Q99848 306 aaKnown RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 GORASP1Q9BQQ3 440 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 TRIM62Q9BVG3 475 aa13.93□□□□□ -0.18
UBE4B-206ENST00000466379 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
UBE4B-206ENST00000466379 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 ZBTB24O43167 697 aaPredicted RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 UPP2O95045 317 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CA4P22748 312 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 MGAT1P26572 445 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FOXN2P32314 431 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CYP2C18P33260 490 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 PPIDQ08752 370 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 MRPL58Q14197 206 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 SLC1A5Q15758 541 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 PARP6Q2NL67 630 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 GKAP1Q5VSY0 366 aaPredicted RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CASC4Q6P4E1 433 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 BEND5Q7L4P6 421 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 NPAS4Q8IUM7 802 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 SLC44A1Q8WWI5 657 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 ELAC2Q9BQ52 826 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FERMT1Q9BQL6 677 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 HIPK3Q9H422 1215 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FGFR1OP2Q9NVK5 253 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 PCDH10Q9P2E7 1040 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 GRID1Q9ULK0 1009 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 DFFAO00273 331 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 TRIM66O15016 1216 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 PRPF4O43172 522 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 USP12O75317 370 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 SPAG6O75602 509 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 APOEP02649 317 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 INHBAP08476 426 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CCL5P13501 91 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FGFR3P22607 806 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 GARSP41250 739 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 GALNT2Q10471 571 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CBLBQ13191 982 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 PRSS55Q6UWB4 352 aaPredicted RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 RNF19BQ6ZMZ0 732 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 C14orf80Q86SX3 495 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 CACNA2D3Q8IZS8 1091 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 DENND1AQ8TEH3 1009 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 USP33Q8TEY7 942 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 C8orf48Q96LL4 319 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 SEPT5Q99719 369 aaPredicted RBP13.92□□□□□ -0.18
UBE4B-206ENST00000466379 OSBPL2Q9H1P3 480 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 SCML2Q9UQR0 700 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 IKBKGQ9Y6K9 419 aa13.92□□□□□ -0.18
UBE4B-206ENST00000466379 TYROBPO43914 113 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 VNN2O95498 520 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 GALTP07902 379 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 CSH1P0DML2 217 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 CSH2P0DML3 217 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 CCR1P32246 355 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 CD68P34810 354 aaPredicted RBP13.91□□□□□ -0.18
UBE4B-206ENST00000466379 MGAT5BQ3V5L5 792 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 NUGGCQ68CJ6 796 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
UBE4B-206ENST00000466379 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 HDAC11Q96DB2 347 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 SENP1Q9P0U3 644 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 SLC17A6Q9P2U8 582 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
UBE4B-206ENST00000466379 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 ASMTLO95671 621 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 TBX18O95935 607 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SERPINB6P35237 376 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
UBE4B-206ENST00000466379 BRMS1LQ5PSV4 323 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 ARTNQ5T4W7 220 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 LRRC8BQ6P9F7 803 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 APBB2Q92870 758 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 LRRC39Q96DD0 335 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 CABS1Q96KC9 395 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SYBUQ9NX95 663 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SAGE1Q9NXZ1 904 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 IGSF9Q9P2J2 1179 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 OGDHLQ9ULD0 1010 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
UBE4B-206ENST00000466379 SMG5Q9UPR3 1016 aaKnown RBP13.9□□□□□ -0.18
UBE4B-206ENST00000466379 PCDHA11Q9Y5I1 949 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 RAD54BQ9Y620 910 aa13.9□□□□□ -0.18
UBE4B-206ENST00000466379 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms