RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
LRCH3-211ENST00000466054 C3orf49Q96BT1 292 aa4.84□□□□□ -1.63
LRCH3-211ENST00000466054 RITA1Q96K30 269 aa4.84□□□□□ -1.63
LRCH3-211ENST00000466054 TRAPPC9Q96Q05 1148 aa4.84□□□□□ -1.63
LRCH3-211ENST00000466054 FAM167BQ9BTA0 163 aa4.84□□□□□ -1.63
LRCH3-211ENST00000466054 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
LRCH3-211ENST00000466054 VPS4AQ9UN37 437 aa4.84□□□□□ -1.63
LRCH3-211ENST00000466054 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
LRCH3-211ENST00000466054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 H0Y3Z8 333 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 NHLRC4P0CG21 123 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SERPINA4P29622 427 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SLC8A1P32418 973 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 GRK5P34947 590 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 HOXD12P35452 270 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ADD2P35612 726 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 PPM1FP49593 454 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 RPL15P61313 204 aaKnown RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 EFR3AQ14156 821 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SEMA3AQ14563 771 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 PFKFB3Q16875 520 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 Q4G0T1 1027 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 GLE1Q53GS7 698 aaKnown RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ANKRD40Q6AI12 368 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 TMEM88Q6PEY1 159 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SHC4Q6S5L8 630 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 RANBP10Q6VN20 620 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 NRACQ8N912 160 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SRFBP1Q8NEF9 429 aaKnown RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ZNF398Q8TD17 642 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 TRMT61AQ96FX7 289 aaKnown RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 P2RY11Q96G91 374 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ZNF845Q96IR2 970 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-211ENST00000466054 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SENP7Q9BQF6 1050 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 MECRQ9BV79 373 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 TWSG1Q9GZX9 223 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 NUAK2Q9H093 628 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 G6PC2Q9NQR9 355 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 TXLNGQ9NUQ3 528 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 GPR52Q9Y2T5 361 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 PCDHGB3Q9Y5G1 929 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 DGKBQ9Y6T7 804 aa4.83□□□□□ -1.64
LRCH3-211ENST00000466054 SPATA31A5Q5VU36 1347 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 SPATA31A7Q8IWB4 1347 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 CYP3A7-CYP3A51PA0A087WV96 503 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3DA0A087WVF3 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3IA0A087WXS9 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3EA0A087X179 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3KA0A087X1G2 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3BA6NDS4 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3FA6NER0 549 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3LB9A6J9 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 M0QYT0 321 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 FGBP02675 491 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 ALDOAP04075 364 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TMEM191BP0C7N4 346 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3HP0C7X1 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 CYP2A6P11509 494 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 IGFBP2P18065 325 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 CYP3A7P24462 503 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 NDUFS1P28331 727 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 AARSP49588 968 aaKnown RBP eCLIP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 SMAD1Q15797 465 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 CC2D1BQ5T0F9 858 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3GQ6DHY5 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3CQ6IPX1 549 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 KYAT3Q6YP21 454 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 ZNF813Q6ZN06 617 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 Q6ZTC4 211 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 IRF2BP2Q7Z5L9 587 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 MOGAT3Q86VF5 341 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 ZNF354CQ86Y25 554 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 ANKRD18AQ8IVF6 992 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 SMAP1Q8IYB5 467 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TBC1D3Q8IZP1 549 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 CPXCR1Q8N123 301 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 ADPRHL1Q8NDY3 354 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 PNISRQ8TF01 805 aaKnown RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 PPM1EQ8WY54 764 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 GCC1Q96CN9 775 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 NPAS1Q99742 590 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TAF1DQ9H5J8 278 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 TRPC5Q9UL62 973 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-211ENST00000466054 SLC12A4Q9UP95 1085 aa4.82□□□□□ -1.64
LRCH3-211ENST00000466054 PRYO14603 147 aa4.81□□□□□ -1.64
LRCH3-211ENST00000466054 HNRNPRO43390 633 aaKnown RBP4.81□□□□□ -1.64
LRCH3-211ENST00000466054 RNF8O76064 485 aa4.81□□□□□ -1.64
LRCH3-211ENST00000466054 OAZ2O95190 189 aa4.81□□□□□ -1.64
LRCH3-211ENST00000466054 TK1P04183 234 aa4.81□□□□□ -1.64
LRCH3-211ENST00000466054 KRT10P13645 584 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms