RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TXNL4AP83876 142 aaKnown RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 DPYSQ14117 519 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 GK3PQ14409 553 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 HERC3Q15034 1050 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ZNF667Q5HYK9 610 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 SNX32Q86XE0 403 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 CHERPQ8IWX8 916 aaKnown RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 BBS5Q8N3I7 341 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ZNF781Q8N8C0 355 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 PDCD6IPQ8WUM4 868 aaKnown RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 PRPF31Q8WWY3 499 aaKnown RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 ZNF302Q9NR11 478 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ZNHIT2Q9UHR6 403 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ADAM28Q9UKQ2 775 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 B4GALT4O60513 344 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ATP6V1G1O75348 118 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 XRCC1P18887 633 aaPredicted RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 ALDH3B2P48448 385 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 CDKL1Q00532 357 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 RFTN1Q14699 578 aaPredicted RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 C15orf59Q2T9L4 293 aaPredicted RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 CASC4Q6P4E1 433 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 ZBTB33Q86T24 672 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 HACE1Q8IYU2 909 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 CPSF7Q8N684 471 aaKnown RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 BHLHE22Q8NFJ8 381 aaPredicted RBP20.22■□□□□ 0.83
SDF4-205ENST00000465727 PKP2Q99959 881 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 RNPEPQ9H4A4 650 aa20.22■□□□□ 0.83
SDF4-205ENST00000465727 PSME4Q14997 1843 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 MSCO60682 206 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 SERPINB5P36952 375 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 GP5P40197 560 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 MAGEA12P43365 314 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 TUBA4AP68366 448 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 TRNP1Q6NT89 227 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 LRRC8BQ6P9F7 803 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 KLHL35Q6PF15 583 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 NLGN1Q8N2Q7 840 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 TRIML2Q8N7C3 387 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 TMEM102Q8N9M5 508 aaPredicted RBP20.21■□□□□ 0.83
SDF4-205ENST00000465727 QKIQ96PU8 341 aaKnown RBP eCLIP20.21■□□□□ 0.83
SDF4-205ENST00000465727 CCT7Q99832 543 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 RNF146Q9NTX7 359 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 BLOC1S6Q9UL45 172 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 SH3GLB1Q9Y371 365 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 PCDHGA4Q9Y5G9 962 aa20.21■□□□□ 0.83
SDF4-205ENST00000465727 TADA2AO75478 443 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 GRIA1P42261 906 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 RAP1GAPP47736 663 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 GRTP1Q5TC63 336 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 DUS1LQ6P1R4 473 aaKnown RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 AMIGO2Q86SJ2 522 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 TTLL6Q8N841 843 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 TDRD5Q8NAT2 981 aaKnown RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 TMEM176AQ96HP8 235 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 CPNE1Q99829 537 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 NUF2Q9BZD4 464 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 EIF2B3Q9NR50 452 aaKnown RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 FAIMQ9NVQ4 179 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 EPS15L1Q9UBC2 864 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 SPATA31C2B4DYI2 1134 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 VDRP11473 427 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 PPARGP37231 505 aaPredicted RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 NUP107P57740 925 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 RAB15P59190 212 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 CDO1Q16878 200 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 SH3D19Q5HYK7 790 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 POTEHQ6S545 545 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 RNF168Q8IYW5 571 aaPredicted RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 UNC5BQ8IZJ1 945 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 OR52B2Q96RD2 323 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 OSBPL11Q9BXB4 747 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 ILKAPQ9H0C8 392 aaPredicted RBP20.2■□□□□ 0.82
SDF4-205ENST00000465727 MID2Q9UJV3 735 aa20.2■□□□□ 0.82
SDF4-205ENST00000465727 ADCY6O43306 1168 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 CILPO75339 1184 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 TRPA1O75762 1119 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 H6PDO95479 791 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 CEACAM7Q14002 265 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 CCDC14Q49A88 953 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 FAM182AQ5T1J6 154 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 SCYL2Q6P3W7 929 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 ISLR2Q6UXK2 745 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 TRIM67Q6ZTA4 783 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 FAM83AQ86UY5 434 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 GALNT4Q8N4A0 578 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 MAPK15Q8TD08 544 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 ZNF597Q96LX8 424 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 SNRNP25Q9BV90 132 aaKnown RBP20.19■□□□□ 0.82
SDF4-205ENST00000465727 PLGRKTQ9HBL7 147 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 SNX15Q9NRS6 342 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 FAF1Q9UNN5 650 aaPredicted RBP20.19■□□□□ 0.82
SDF4-205ENST00000465727 ANK1P16157 1881 aa20.19■□□□□ 0.82
SDF4-205ENST00000465727 SH3PXD2BA1X283 911 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MATN2O00339 956 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 HDAC3O15379 428 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 TRIM13O60858 407 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms