RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ARL13BQ3SXY8 428 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 NAPEPLDQ6IQ20 393 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 RSRC2Q7L4I2 434 aaKnown RBP15.58■□□□□ 0.08
HDAC6-214ENST00000465269 CCDC186Q7Z3E2 898 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 AHI1Q8N157 1196 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 OXR1Q8N573 874 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 SLC46A1Q96NT5 459 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 ARHGAP20Q9P2F6 1191 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 SUN2Q9UH99 717 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 U3KQA8 63 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 COL27A1Q8IZC6 1860 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3DA0A087WVF3 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3IA0A087WXS9 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3EA0A087X179 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3KA0A087X1G2 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3FA6NER0 549 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TTC34A8MYJ7 566 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3LB9A6J9 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3HP0C7X1 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 POLR2EP19388 210 aaKnown RBP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TGM2P21980 687 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 SLC45A4Q5BKX6 768 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 C9orf64Q5T6V5 341 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3GQ6DHY5 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3CQ6IPX1 549 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 RFWD3Q6PCD5 774 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 CRTC1Q6UUV9 634 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TADA2BQ86TJ2 420 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TBC1D3Q8IZP1 549 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 MFSD2AQ8NA29 543 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 OR4C6Q8NH72 309 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 TMA16Q96EY4 203 aaKnown RBP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 CYFIP2Q96F07 1278 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 MRGPRX3Q96LB0 322 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-214ENST00000465269 ABCG4Q9H172 646 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 CLIC5Q9NZA1 410 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 PAXBP1Q9Y5B6 917 aa15.57■□□□□ 0.08
HDAC6-214ENST00000465269 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 H3BQV1 296 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 RTN2O75298 545 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 AFPP02771 609 aaKnown RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 ATP5BP06576 529 aaKnown RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 CKMT1AP12532 417 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 TGIF1Q15583 401 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 C4orf17Q53FE4 359 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 MMS22LQ6ZRQ5 1243 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 STK40Q8N2I9 435 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 MAPK15Q8TD08 544 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 ARRDC3Q96B67 414 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 APOLD1Q96LR9 279 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 FAM129BQ96TA1 746 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 ARHGAP9Q9BRR9 750 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 VRTNQ9H8Y1 702 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 UPF2Q9HAU5 1272 aaKnown RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 STIM2Q9P246 746 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 SFMBT1Q9UHJ3 866 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 INTS6Q9UL03 887 aaKnown RBP15.56■□□□□ 0.08
HDAC6-214ENST00000465269 STRIP2Q9ULQ0 834 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 USP3Q9Y6I4 520 aa15.56■□□□□ 0.08
HDAC6-214ENST00000465269 DOPEY1Q5JWR5 2465 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 MSI1O43347 362 aaKnown RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 LATO43561 262 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 TBL1XO60907 577 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 RNASEH1O60930 286 aaKnown RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 NEBLO76041 1014 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 CR2P20023 1033 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 CSKP41240 450 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 ASPAP45381 313 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 PSEN1P49768 467 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 TRIP4Q15650 581 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 IGFBP7Q16270 282 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 ZNF542PQ5EBM4 170 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 XXYLT1Q8NBI6 393 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 IFI44Q8TCB0 444 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 KLK6Q92876 244 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 MYEOVQ96EZ4 313 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 CCNL2Q96S94 520 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 CCDC39Q9UFE4 941 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 FZD4Q9ULV1 537 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 SCML1Q9UN30 329 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 ENTPD2Q9Y5L3 495 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 CLIC4Q9Y696 253 aa15.55■□□□□ 0.08
HDAC6-214ENST00000465269 SPENQ96T58 3664 aaKnown RBP15.55■□□□□ 0.08
HDAC6-214ENST00000465269 ICE1Q9Y2F5 2266 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 CDRT15L2A8MXV6 281 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 VAV1P15498 845 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 GOT1P17174 413 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 GJB2P29033 226 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC6-214ENST00000465269 DLG4P78352 724 aa15.54■□□□□ 0.08
HDAC6-214ENST00000465269 SFSWAPQ12872 951 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms