RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ACDQ96AP0 544 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 PANX2Q96RD6 677 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 IRF2BPLQ9H1B7 796 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 OSBPL2Q9H1P3 480 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 PRMT8Q9NR22 394 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 ABCB8Q9NUT2 735 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 SPTLC3Q9NUV7 552 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 ELOVL2Q9NXB9 296 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 RAPGEFL1Q9UHV5 662 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 GGA2Q9UJY4 613 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 FBXO4Q9UKT5 387 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 HCN2Q9UL51 889 aa14.98□□□□□ -0.01
SQSTM1-205ENST00000464493 A0A1B0GVM2 712 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 TCAF2A6NFQ2 919 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 DRGXA6NNA5 263 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 E9PAM4 449 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 SRGAP2O75044 1071 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 RNF8O76064 485 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 PAPSS2O95340 614 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 KLF8O95600 359 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 CHRM1P11229 460 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 PABPC1P11940 636 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 CD70P32970 193 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 EIF4HQ15056 248 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 FSCBQ5H9T9 825 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 TMEM215Q68D42 235 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 TSSK4Q6SA08 328 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 SLFN11Q7Z7L1 901 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 CIR1Q86X95 450 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF683Q8IZ20 524 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 AHI1Q8N157 1196 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 CCAR2Q8N163 923 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 TXNDC5Q8NBS9 432 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 WFIKKN2Q8TEU8 576 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 UCMAQ8WVF2 138 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 CTNNBL1Q8WYA6 563 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 ARHGEF26Q96DR7 871 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 PACSIN1Q9BY11 444 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 ZDHHC4Q9NPG8 344 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 POLR3BQ9NW08 1133 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 KIAA1522Q9P206 1035 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 OR12D3Q9UGF7 316 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 MMP17Q9ULZ9 603 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 SLC8A2Q9UPR5 921 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 MUC6Q6W4X9 2439 aa14.97□□□□□ -0.01
SQSTM1-205ENST00000464493 IGLV3-10A0A075B6K4 115 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CLDN11O75508 207 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 TMEM253P0C7T8 217 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 SP9P0CG40 484 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 HNRNPLP14866 589 aaKnown RBP eCLIP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 NTSR1P30989 418 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 IRAK1P51617 712 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 AIF1P55008 147 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CDH4P55283 916 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 NRG1Q02297 640 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 SCAPQ12770 1279 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 LMAN2Q12907 356 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF177Q13360 481 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 DMC1Q14565 340 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ACAP1Q15027 740 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 E2F5Q15329 346 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ZNF528Q3MIS6 628 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 EGFLAMQ63HQ2 1017 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 SDE2Q6IQ49 451 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CHST9Q7L1S5 443 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ADIPOR2Q86V24 386 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CCDC170Q8IYT3 715 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CHPFQ8IZ52 775 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 SPC24Q8NBT2 197 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CIPCQ9C0C6 399 aa14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-205ENST00000464493 CACNA1HO95180 2353 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 K7ESF4 209 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 SGK1O00141 431 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 MYO1FO00160 1098 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 NPC1O15118 1278 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 ADAM23O75077 832 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 CNTN5O94779 1100 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 TDGF1P13385 188 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 POLR2EP19388 210 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 NRLP54845 237 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 OXCT1P55809 520 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 PIGHQ14442 188 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 CRY1Q16526 586 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 ALFQ53S48 1182 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 EFHC2Q5JST6 749 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 MBLAC2Q68D91 279 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 TMTC1Q8IUR5 882 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 CAMKK1Q8N5S9 505 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 ARFGAP1Q8N6T3 406 aa14.95□□□□□ -0.02
SQSTM1-205ENST00000464493 ZNF564Q8TBZ8 553 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms