RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 WDR5BQ86VZ2 330 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 CIR1Q86X95 450 aaPredicted RBP17.61■□□□□ 0.41
VPS52-215ENST00000464425 MCOLN2Q8IZK6 566 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 C3orf20Q8ND61 904 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 CCDC42Q96M95 316 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 RAB6CQ9H0N0 254 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 ISCUQ9H1K1 167 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 NHEJ1Q9H9Q4 299 aaPredicted RBP17.61■□□□□ 0.41
VPS52-215ENST00000464425 TMPRSS4Q9NRS4 437 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 ARHGEF38Q9NXL2 777 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 CACNA2D2Q9NY47 1150 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 GGA2Q9UJY4 613 aa17.61■□□□□ 0.41
VPS52-215ENST00000464425 A0A087X0T9 212 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 C2CD4BA6NLJ0 364 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 SIGLEC16A6NMB1 481 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 I6L893 689 aaPredicted RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 AXIN1O15169 862 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 GFRA3O60609 400 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 LMNAP02545 664 aaKnown RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 FAM228BP0C875 321 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 PABPC1P11940 636 aaKnown RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 HOXB2P14652 356 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 RRM1P23921 792 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 SDC4P31431 198 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 RDXP35241 583 aaKnown RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 GSCP56915 257 aaPredicted RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 CDH18Q13634 790 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 SLC18A3Q16572 532 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 BRMS1LQ5PSV4 323 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 RNF43Q68DV7 783 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 FBXL22Q6P050 247 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 PRR23BQ6ZRT6 265 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 C14orf80Q86SX3 495 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 ADIPOR2Q86V24 386 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 FAM131BQ86XD5 332 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 CCDC117Q8IWD4 279 aaPredicted RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 FIBINQ8TAL6 211 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 UCMAQ8WVF2 138 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 IGSF8Q969P0 613 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
VPS52-215ENST00000464425 VANGL2Q9ULK5 521 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 PAXBP1Q9Y5B6 917 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 RAD54BQ9Y620 910 aa17.6■□□□□ 0.41
VPS52-215ENST00000464425 TCRBV21S2A2A0A5A6 115 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 PRR23AA6NEV1 266 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 H0Y626 953 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 TIMM44O43615 452 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 LUC7L3O95232 432 aaKnown RBP17.59■□□□□ 0.41
VPS52-215ENST00000464425 FTLP02792 175 aaPredicted RBP17.59■□□□□ 0.41
VPS52-215ENST00000464425 LMAN2Q12907 356 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 MTA1Q13330 715 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 LPAL2Q16609 132 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 FSCBQ5H9T9 825 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 BNIPLQ7Z465 357 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 CCDC170Q8IYT3 715 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 AHI1Q8N157 1196 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.59■□□□□ 0.41
VPS52-215ENST00000464425 WFIKKN2Q8TEU8 576 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 CYB5D2Q8WUJ1 264 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 HMGB4Q8WW32 186 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 DEF6Q9H4E7 631 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 POLMQ9NP87 494 aaPredicted RBP17.59■□□□□ 0.41
VPS52-215ENST00000464425 THAP10Q9P2Z0 257 aaPredicted RBP17.59■□□□□ 0.41
VPS52-215ENST00000464425 EBF1Q9UH73 591 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 NENFQ9UMX5 172 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 INVSQ9Y283 1065 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 STON1Q9Y6Q2 735 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 FANCMQ8IYD8 2048 aa17.59■□□□□ 0.41
VPS52-215ENST00000464425 PIEZO1Q92508 2521 aa17.58■□□□□ 0.41
VPS52-215ENST00000464425 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 A0A1W2PQF6 199 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 TCRBV5S1A1TA0A578 114 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ATMINO43313 823 aaPredicted RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 AKR1B10O60218 316 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ALDH1A2O94788 518 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ENDOD1O94919 500 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 GPD1P21695 349 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 IL12RB1P42701 662 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 NUMBP49757 651 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 IRAK1P51617 712 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 SIM2Q14190 667 aaPredicted RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 EIF4HQ15056 248 aaKnown RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 RABGAP1LQ5R372 815 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 MBLAC2Q68D91 279 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 KIAA1211LQ6NV74 962 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ALKBH5Q6P6C2 394 aaKnown RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 DCUN1D2Q6PH85 259 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 CEP68Q76N32 757 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 KIAA0907Q7Z7F0 614 aaPredicted RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 PGBD3Q8N328 593 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ZNF557Q8N988 423 aaPredicted RBP17.58■□□□□ 0.4
VPS52-215ENST00000464425 SUMF1Q8NBK3 374 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 MDGA1Q8NFP4 955 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 LMLNQ96KR4 655 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 MCEEQ96PE7 176 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 GABRG3Q99928 467 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 TPSD1Q9BZJ3 242 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms