RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	PRDM16	Q9HAZ2	1276 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	PLEKHA2	Q9HB19	425 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	RRN3	Q9NYV6	651 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	KLHL13	Q9P2N7	655 aa		4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	COPG1	Q9Y678	874 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-210	ENST00000464313	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	TK1	P04183	234 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	PRKCG	P05129	697 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CYP3A4	P08684	503 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CSF1	P09603	554 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CKMT1A	P12532	417 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	LYL1	P12980	280 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	ST6GAL1	P15907	406 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CDK7	P50613	346 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	ACTR2	P61160	394 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	B4GALNT1	Q00973	533 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	PFKFB3	Q16875	520 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	DHRS13	Q6UX07	377 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	SLC39A5	Q6ZMH5	540 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	RFX6	Q8HWS3	928 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	RHPN2	Q8IUC4	686 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	ADGRF3	Q8IZF5	1079 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CEP70	Q8NHQ1	597 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	OSR1	Q8TAX0	266 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	SLC2A12	Q8TD20	617 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF845	Q96IR2	970 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	COG8	Q96MW5	612 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	FCRL5	Q96RD9	977 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	SENP7	Q9BQF6	1050 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	HERC2P3	Q9BVR0	1158 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	GATA5	Q9BWX5	397 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	TM2D2	Q9BX73	214 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	TWSG1	Q9GZX9	223 aa		4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-210	ENST00000464313	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	C3orf70	A6NLC5	250 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	STX16-NPEPL1	H3BU86	382 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	GRM8	O00222	908 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	STX16	O14662	325 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	RNF8	O76064	485 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CNTN5	O94779	1100 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	LATS1	O95835	1130 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ALDOC	P09972	364 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	RFPL3S	P0C7P2	107 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CYP3A7	P24462	503 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	TACR3	P29371	465 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	MAPK9	P45984	424 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CCT5	P48643	541 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	MTA1	Q13330	715 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	DCTN1	Q14203	1278 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF268	Q14587	947 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CEP78	Q5JTW2	689 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF484	Q5JVG2	852 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	FBXO47	Q5MNV8	452 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	TMEM63B	Q5T3F8	832 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF425	Q6IV72	752 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	SRFBP1	Q8NEF9	429 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	PPM1E	Q8WY54	764 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	MAP4K1	Q92918	833 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ARRDC3	Q96B67	414 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	UBXN10	Q96LJ8	280 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	PYM1	Q9BRP8	204 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ABHD14A	Q9BUJ0	271 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	HTATIP2	Q9BUP3	242 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CLPB	Q9H078	707 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	PDE11A	Q9HCR9	933 aa		4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF70	Q9UC06	446 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-210	ENST00000464313	CCDC189	A1A4V9	331 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	TFRC	P02786	760 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	ACP5	P13686	325 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	HSD3B1	P14060	373 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	IGFBP2	P18065	325 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	CNTF	P26441	200 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	CDK18	Q07002	472 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	SLC10A2	Q12908	348 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	TBRG1	Q3YBR2	411 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	ANXA2R	Q3ZCQ2	193 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	PTF1A	Q7RTS3	328 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	ANKRD18A	Q8IVF6	992 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	CPO	Q8IVL8	374 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	LINS1	Q8NG48	757 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	ZNF398	Q8TD17	642 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	WASF1	Q92558	559 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	PIGK	Q92643	395 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	KCNJ9	Q92806	393 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	KTI12	Q96EK9	354 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	PIGS	Q96S52	555 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	HDHD5	Q9BXW7	423 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	TRIM2	Q9C040	744 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	BAG5	Q9UL15	447 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	DERA	Q9Y315	318 aa		4.55	□□□□□ -1.68
PTPN12-210	ENST00000464313	WDR17	Q8IZU2	1322 aa		4.54	□□□□□ -1.68
PTPN12-210	ENST00000464313	SLC22A23	A1A5C7	686 aa		4.54	□□□□□ -1.68
PTPN12-210	ENST00000464313	NPIPB13	A6NJU9	1138 aa		4.54	□□□□□ -1.68
PTPN12-210	ENST00000464313	NPIPB5	A8MRT5	1133 aa		4.54	□□□□□ -1.68
PTPN12-210	ENST00000464313	NPIPB4	C9JG80	1138 aa		4.54	□□□□□ -1.68

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