RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 DGKKQ5KSL6 1271 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 EMC10Q5UCC4 262 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 KIAA0907Q7Z7F0 614 aaPredicted RBP19.55■□□□□ 0.72
LMNB1-204ENST00000463908 CIR1Q86X95 450 aaPredicted RBP19.55■□□□□ 0.72
LMNB1-204ENST00000463908 LRRC8AQ8IWT6 810 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 SUGP1Q8IWZ8 645 aaKnown RBP19.55■□□□□ 0.72
LMNB1-204ENST00000463908 FIBINQ8TAL6 211 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 RPRD1AQ96P16 312 aaPredicted RBP19.55■□□□□ 0.72
LMNB1-204ENST00000463908 OR12D3Q9UGF7 316 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 USP34Q70CQ2 3546 aa19.55■□□□□ 0.72
LMNB1-204ENST00000463908 TBC1D3BA6NDS4 549 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 E9PAM4 449 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 NCAM2O15394 837 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 SRGAP2O75044 1071 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 APODP05090 189 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 IL1R2P27930 398 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 HLA-FP30511 346 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 PCK1P35558 622 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 TNFRSF4P43489 277 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 RPS9P46781 194 aaKnown RBP19.54■□□□□ 0.72
LMNB1-204ENST00000463908 NRG1Q02297 640 aaPredicted RBP19.54■□□□□ 0.72
LMNB1-204ENST00000463908 CA9Q16790 459 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 GEN1Q17RS7 908 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 ALFQ53S48 1182 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 ACBD5Q5T8D3 534 aaPredicted RBP19.54■□□□□ 0.72
LMNB1-204ENST00000463908 MANEALQ5VSG8 457 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 TMEM215Q68D42 235 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 Q6ZS52 159 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 CARNMT1Q8N4J0 409 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 TERB1Q8NA31 727 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 RFFLQ8WZ73 363 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 EXOC4Q96A65 974 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 GPATCH2LQ9NWQ4 482 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 SALL4Q9UJQ4 1053 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 KMT2EQ8IZD2 1858 aa19.54■□□□□ 0.72
LMNB1-204ENST00000463908 PROSCO94903 275 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 LUC7L3O95232 432 aaKnown RBP19.53■□□□□ 0.72
LMNB1-204ENST00000463908 CD70P32970 193 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 AIF1P55008 147 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 NHLH1Q02575 133 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 RABGAP1LQ5R372 815 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 ERMARDQ5T6L9 678 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 TXNRD3NBQ6F5E7 133 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 PKN3Q6P5Z2 889 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 RHOT2Q8IXI1 618 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 CCAR2Q8N163 923 aaKnown RBP19.53■□□□□ 0.72
LMNB1-204ENST00000463908 SYNPOQ8N3V7 929 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.53■□□□□ 0.72
LMNB1-204ENST00000463908 LACRTQ9GZZ8 138 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 MPP6Q9NZW5 540 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 ZNF212Q9UDV6 495 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 USP18Q9UMW8 372 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 DUSP10Q9Y6W6 482 aa19.53■□□□□ 0.72
LMNB1-204ENST00000463908 A0A0U1RQJ8 604 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 RNF40O75150 1001 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 LRIG2O94898 1065 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 DESP17661 470 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 L1CAMP32004 1257 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 KIR2DL1P43626 348 aaPredicted RBP19.52■□□□□ 0.72
LMNB1-204ENST00000463908 LMAN2Q12907 356 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 SEMA3BQ13214 749 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 LRRC32Q14392 662 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 FBXO43Q4G163 708 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 LRRC31Q6UY01 552 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 MFN1Q8IWA4 741 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 OR52K2Q8NGK3 314 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 ATRIPQ8WXE1 791 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 NCAPGQ9BPX3 1015 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 DESI2Q9BSY9 194 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 SNRNP25Q9BV90 132 aaKnown RBP19.52■□□□□ 0.72
LMNB1-204ENST00000463908 CHRDQ9H2X0 955 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 ABCB8Q9NUT2 735 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 C2orf42Q9NWW7 574 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 PPARGC1AQ9UBK2 798 aaKnown RBP19.52■□□□□ 0.72
LMNB1-204ENST00000463908 INTS6Q9UL03 887 aaKnown RBP19.52■□□□□ 0.72
LMNB1-204ENST00000463908 NEU3Q9UQ49 428 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 STARD13Q9Y3M8 1113 aa19.52■□□□□ 0.72
LMNB1-204ENST00000463908 MIA3Q5JRA6 1907 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 TYW5A2RUC4 315 aaKnown RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 PJA2O43164 708 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 PRPSAP2O60256 369 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 ARHGAP25P42331 645 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 CDH4P55283 916 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 SEC13P55735 322 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 TAS2R40P59535 323 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 CCZ1BP86790 482 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 CCZ1P86791 482 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 SLC25A11Q02978 314 aaKnown RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 MTAPQ13126 283 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 MESDQ14696 234 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 PREPLQ4J6C6 727 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 EFHC2Q5JST6 749 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 KCNT1Q5JUK3 1230 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 TTC39BQ5VTQ0 682 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 CXorf57Q6NSI4 855 aaKnown RBP19.51■□□□□ 0.71
LMNB1-204ENST00000463908 CHST9Q7L1S5 443 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 ADIPOR2Q86V24 386 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 USP33Q8TEY7 942 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 PDLIM2Q96JY6 352 aa19.51■□□□□ 0.71
LMNB1-204ENST00000463908 ZDHHC4Q9NPG8 344 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms