RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MRGPRX3Q96LB0 322 aa21.27■■□□□ 1
PDLIM4-205ENST00000463615 PRMT1Q99873 361 aaKnown RBP21.27■■□□□ 1
PDLIM4-205ENST00000463615 TUBGCP2Q9BSJ2 902 aa21.27■■□□□ 1
PDLIM4-205ENST00000463615 NUP62CLQ9H1M0 184 aa21.27■■□□□ 1
PDLIM4-205ENST00000463615 SLC32A1Q9H598 525 aa21.27■■□□□ 1
PDLIM4-205ENST00000463615 STIM2Q9P246 746 aa21.27■■□□□ 1
PDLIM4-205ENST00000463615 XPO7Q9UIA9 1087 aaKnown RBP21.27■■□□□ 1
PDLIM4-205ENST00000463615 CACNA1BQ00975 2339 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 MAP1BP46821 2468 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 SRPRAP08240 638 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 BPIFB4P59827 614 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 PITX1P78337 314 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 CDK17Q00537 523 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 CDH18Q13634 790 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 HNRNPA1L2Q32P51 320 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 PLEKHG6Q3KR16 790 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 FSCBQ5H9T9 825 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 DCAF12L1Q5VU92 463 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 OLFML1Q6UWY5 402 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 C11orf57Q6ZUT1 292 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 SLC26A9Q7LBE3 791 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 CCDC117Q8IWD4 279 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 DEFB106AQ8N104 65 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 HDDC3Q8N4P3 179 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 RSPH9Q9H1X1 276 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 FSCN3Q9NQT6 498 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 KIAA1522Q9P206 1035 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 SLC12A6Q9UHW9 1150 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 SCML1Q9UN30 329 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 ITIH6Q6UXX5 1313 aa21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 KMT2BQ9UMN6 2715 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-205ENST00000463615 MEI4A8MW99 385 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 MOCS2O96007 188 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 MAOBP27338 520 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 CDH5P33151 784 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 SLC12A1Q13621 1099 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 HNRNPDQ14103 355 aaKnown RBP21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 PITRM1Q5JRX3 1037 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 TTC39BQ5VTQ0 682 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 SLC47A2Q86VL8 602 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 ZDHHC17Q8IUH5 632 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 LGI2Q8N0V4 545 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 CARNMT1Q8N4J0 409 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 ZNF366Q8N895 744 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 DEFB124Q8NES8 71 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 GTPBP2Q9BX10 602 aaKnown RBP21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 OSGEPQ9NPF4 335 aa21.25■□□□□ 0.99
PDLIM4-205ENST00000463615 ADAMTS9Q9P2N4 1935 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 CD59P13987 128 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 CCR1P32246 355 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 KRT9P35527 623 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 PLK1P53350 603 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 ST8SIA6P61647 398 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 KCNMA1Q12791 1236 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 RAP1GAP2Q684P5 730 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 ZNF776Q68DI1 518 aaPredicted RBP21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 USP30Q70CQ3 517 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 CHSY1Q86X52 802 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 CFAP52Q8N1V2 620 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 C1orf131Q8NDD1 294 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 NAA15Q9BXJ9 866 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 TMEM51Q9NW97 253 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 ERVW-1Q9UQF0 538 aa21.24■□□□□ 0.99
PDLIM4-205ENST00000463615 TARSL2A2RTX5 802 aaKnown RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 F5H5T6 163 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 BCAT2O15382 392 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 DAB1O75553 588 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 MOCS3O95396 460 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 DNTTP04053 509 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 ERBB2P04626 1255 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 ABCB4P21439 1286 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 EEF1GP26641 437 aaKnown RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 ACSL1P33121 698 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 SCNN1AP37088 669 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 VASPP50552 380 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 SLC6A3Q01959 620 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 GRIK2Q13002 908 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 TTC31Q49AM3 519 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 PTPN20Q4JDL3 420 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 KLHDC7AQ5VTJ3 777 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 FAM183BPQ6ZVS7 135 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 PASD1Q8IV76 773 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 BTBD1Q9H0C5 482 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 FAM204AQ9H8W3 233 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 SGK2Q9HBY8 427 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 LMBRD1Q9NUN5 540 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 DDIT4Q9NX09 232 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 RRN3Q9NYV6 651 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 CEP83Q9Y592 693 aa21.23■□□□□ 0.99
PDLIM4-205ENST00000463615 A0A1B0GVM2 712 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 TCAF2A6NFQ2 919 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 C10orf142B7Z368 130 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 H0Y626 953 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 ZNF883P0CG24 379 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 NOS2P35228 1153 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 GABRB2P47870 512 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 OXCT1P55809 520 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 ECT2LQ008S8 904 aa21.22■□□□□ 0.99
PDLIM4-205ENST00000463615 SFSWAPQ12872 951 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms