RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 ATMINO43313 823 aaPredicted RBP18.33■□□□□ 0.52
SF1-212ENST00000463343 RNF40O75150 1001 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 PAGE1O75459 146 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 ZNF806P0C7X5 589 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 TACR2P21452 398 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 GPD1P21695 349 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 HOXD9P28356 352 aaPredicted RBP18.33■□□□□ 0.52
SF1-212ENST00000463343 TNFRSF4P43489 277 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
SF1-212ENST00000463343 ASTE1Q2TB18 679 aaPredicted RBP18.33■□□□□ 0.52
SF1-212ENST00000463343 FBXO43Q4G163 708 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 BRMS1LQ5PSV4 323 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 EMC10Q5UCC4 262 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 RNF43Q68DV7 783 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 HEATR6Q6AI08 1181 aaKnown RBP18.33■□□□□ 0.52
SF1-212ENST00000463343 PKN3Q6P5Z2 889 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
SF1-212ENST00000463343 CNGA4Q8IV77 575 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 CAMKK1Q8N5S9 505 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 TKTL2Q9H0I9 626 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 PARVAQ9NVD7 372 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 TMEM51Q9NW97 253 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 C2orf42Q9NWW7 574 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 ATG2BQ96BY7 2078 aa18.33■□□□□ 0.52
SF1-212ENST00000463343 TBC1D3BA6NDS4 549 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 TM4SF5O14894 197 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 TBL1XO60907 577 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 CHRM1P11229 460 aaPredicted RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 RDXP35241 583 aaKnown RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 DGKGP49619 791 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 RPS24P62847 133 aaKnown RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 OGDHQ02218 1023 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 CCDC122Q5T0U0 273 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 ALKBH5Q6P6C2 394 aaKnown RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 DCUN1D2Q6PH85 259 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 CHSY1Q86X52 802 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 LGI2Q8N0V4 545 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 CFAP52Q8N1V2 620 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 TERB1Q8NA31 727 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 ZC3H10Q96K80 434 aaKnown RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 PRICKLE1Q96MT3 831 aaPredicted RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 MCEEQ96PE7 176 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 SLC2A11Q9BYW1 496 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 TMPRSS4Q9NRS4 437 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 STIM2Q9P246 746 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 CNOT8Q9UFF9 292 aaKnown RBP18.32■□□□□ 0.52
SF1-212ENST00000463343 SLC27A6Q9Y2P4 619 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 PCDHGA5Q9Y5G8 931 aa18.32■□□□□ 0.52
SF1-212ENST00000463343 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 PRRT4C9JH25 899 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 GDF9O60383 454 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 MYBL1P10243 752 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 ZNF143P52747 638 aaPredicted RBP18.31■□□□□ 0.52
SF1-212ENST00000463343 GFPT1Q06210 699 aaPredicted RBP18.31■□□□□ 0.52
SF1-212ENST00000463343 MTA1Q13330 715 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 CDO1Q16878 200 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
SF1-212ENST00000463343 MPP7Q5T2T1 576 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 FBXL22Q6P050 247 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 STRADAQ7RTN6 431 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 C14orf80Q86SX3 495 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 FAM131BQ86XD5 332 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 HJURPQ8NCD3 748 aaPredicted RBP18.31■□□□□ 0.52
SF1-212ENST00000463343 USP33Q8TEY7 942 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 ZNF653Q96CK0 615 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 SIK2Q9H0K1 926 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 MYO1AQ9UBC5 1043 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 HCN2Q9UL51 889 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 HS3ST4Q9Y661 456 aa18.31■□□□□ 0.52
SF1-212ENST00000463343 ANKRD62A6NC57 917 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
SF1-212ENST00000463343 KRT37O76014 449 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 EPN2O95208 641 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 KIR2DL1P43626 348 aaPredicted RBP18.3■□□□□ 0.52
SF1-212ENST00000463343 SEC13P55735 322 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 HDAC4P56524 1084 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 AUHQ13825 339 aaKnown RBP18.3■□□□□ 0.52
SF1-212ENST00000463343 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 C2orf27AQ580R0 203 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 WFDC5Q8TCV5 224 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 FAM172AQ8WUF8 416 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 TRIM11Q96F44 468 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 CNPY3Q9BT09 278 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 TRIM7Q9C029 511 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
SF1-212ENST00000463343 POLR3BQ9NW08 1133 aaPredicted RBP18.3■□□□□ 0.52
SF1-212ENST00000463343 SLC8A2Q9UPR5 921 aa18.3■□□□□ 0.52
SF1-212ENST00000463343 F5H5T6 163 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 CCP110O43303 1012 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 ADRA1BP35368 520 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 GGCXP38435 758 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 GALCP54803 685 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 MRPS21P82921 87 aaKnown RBP18.29■□□□□ 0.52
SF1-212ENST00000463343 GEN1Q17RS7 908 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 PLA2G2CQ5R387 149 aa18.29■□□□□ 0.52
SF1-212ENST00000463343 C10orf76Q5T2E6 689 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms