RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ACACAQ13085 2346 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 RNASEH1O60930 286 aaKnown RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 GABBR2O75899 941 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 FBXO21O94952 628 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 IGHV4-34P06331 123 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 PNOCQ13519 176 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 HNRNPA1L2Q32P51 320 aaKnown RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 KCNT1Q5JUK3 1230 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 LAYNQ6UX15 382 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 ELOA2Q8IYF1 753 aaPredicted RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 KDM1BQ8NB78 822 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 HJURPQ8NCD3 748 aaPredicted RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 GANCQ8TET4 914 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 SKA1Q96BD8 255 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 GSDMAQ96QA5 445 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 ACE2Q9BYF1 805 aaPredicted RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 LMBRD1Q9NUN5 540 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 FBXL12Q9NXK8 326 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 STIM2Q9P246 746 aa20.53■□□□□ 0.88
VARS-221ENST00000463184 HOOK1Q9UJC3 728 aaKnown RBP20.53■□□□□ 0.88
VARS-221ENST00000463184 A0A1W2PPC4 97 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 TRABD2BA6NFA1 517 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 VILLO15195 856 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 C21orf59P57076 290 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 LRRC63Q05C16 580 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 ARID5BQ14865 1188 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 SMAD1Q15797 465 aaKnown RBP20.52■□□□□ 0.88
VARS-221ENST00000463184 NADSYN1Q6IA69 706 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 CCDC117Q8IWD4 279 aaPredicted RBP20.52■□□□□ 0.88
VARS-221ENST00000463184 HNRNPLLQ8WVV9 542 aaKnown RBP20.52■□□□□ 0.88
VARS-221ENST00000463184 GTPBP4Q9BZE4 634 aaKnown RBP20.52■□□□□ 0.88
VARS-221ENST00000463184 MTG2Q9H4K7 406 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 METTL14Q9HCE5 456 aaKnown RBP20.52■□□□□ 0.88
VARS-221ENST00000463184 PCDHB4Q9Y5E5 795 aa20.52■□□□□ 0.88
VARS-221ENST00000463184 FAM47DPA6NHR8 397 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 M0QYV0 167 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 PIK3R2O00459 728 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 PMM2O15305 246 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 SIN3BO75182 1162 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 CSKP41240 450 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 FMO5P49326 533 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 PMS1P54277 932 aaKnown RBP20.51■□□□□ 0.87
VARS-221ENST00000463184 GALCP54803 685 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 CYP4F3Q08477 520 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 CAMK2BQ13554 666 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 SOWAHCQ53LP3 525 aaPredicted RBP20.51■□□□□ 0.87
VARS-221ENST00000463184 PDCD7Q8N8D1 485 aaKnown RBP20.51■□□□□ 0.87
VARS-221ENST00000463184 CLEC4CQ8WTT0 213 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 SERPINB11Q96P15 392 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 NT5C1BQ96P26 610 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 FTSJ1Q9UET6 329 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 INTS6Q9UL03 887 aaKnown RBP20.51■□□□□ 0.87
VARS-221ENST00000463184 TMEM131Q92545 1883 aa20.51■□□□□ 0.87
VARS-221ENST00000463184 FASNP49327 2511 aaKnown RBP20.51■□□□□ 0.87
VARS-221ENST00000463184 GOLGA4Q13439 2230 aaKnown RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 URB1O60287 2271 aaKnown RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 A0A1B0GTQ1 180 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 TARSL2A2RTX5 802 aaKnown RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 LRRC72A6NJI9 287 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 E9PAM4 449 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 SRPRAP08240 638 aaKnown RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 NNTQ13423 1086 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 CDH18Q13634 790 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 MARCH9Q86YJ5 346 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 CARNMT1Q8N4J0 409 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 FCRL2Q96LA5 508 aaPredicted RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 MRGPRX3Q96LB0 322 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 PRICKLE1Q96MT3 831 aaPredicted RBP20.5■□□□□ 0.87
VARS-221ENST00000463184 ZSWIM1Q9BR11 485 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 NEUROG2Q9H2A3 272 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 ADAMTS1Q9UHI8 967 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 FZD4Q9ULV1 537 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 ERVW-1Q9UQF0 538 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 TLR6Q9Y2C9 796 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 APC2O95996 2303 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 ITPR1Q14643 2758 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 CELSR3Q9NYQ7 3312 aa20.5■□□□□ 0.87
VARS-221ENST00000463184 A0A1W2PP55 124 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 TRIM49BA6NDI0 452 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 RNF225M0QZC1 329 aaPredicted RBP20.49■□□□□ 0.87
VARS-221ENST00000463184 MID1O15344 667 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 SMC2O95347 1197 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 MOCS3O95396 460 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 RPS24P62847 133 aaKnown RBP20.49■□□□□ 0.87
VARS-221ENST00000463184 IL9RQ01113 521 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 CETN1Q12798 172 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 CST6Q15828 149 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 MS4A13Q5J8X5 152 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 PITRM1Q5JRX3 1037 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 C9orf64Q5T6V5 341 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 NCEH1Q6PIU2 408 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 TMPRSS12Q86WS5 348 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 MMAAQ8IVH4 418 aaKnown RBP20.49■□□□□ 0.87
VARS-221ENST00000463184 DHX40Q8IX18 779 aaKnown RBP20.49■□□□□ 0.87
VARS-221ENST00000463184 PPM1KQ8N3J5 372 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 OR2T34Q8NGX1 318 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 DQX1Q8TE96 717 aaKnown RBP20.49■□□□□ 0.87
VARS-221ENST00000463184 SLC39A13Q96H72 371 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 SLC6A18Q96N87 628 aa20.49■□□□□ 0.87
VARS-221ENST00000463184 ELF4Q99607 663 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms