RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 ADIPOR2Q86V24 386 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 SORCS1Q8WY21 1168 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 P2RY11Q96G91 374 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 BPIFA3Q9BQP9 254 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 GANQ9H2C0 597 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 SUSD2Q9UGT4 822 aa13.55□□□□□ -0.24
HDAC1-203ENST00000463172 EVLQ9UI08 416 aaPredicted RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 MBD1Q9UIS9 605 aaPredicted RBP13.55□□□□□ -0.24
HDAC1-203ENST00000463172 A0A1B0GVM2 712 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TCAF2A6NFQ2 919 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 SRPRAP08240 638 aaKnown RBP13.54□□□□□ -0.24
HDAC1-203ENST00000463172 GNSP15586 552 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 PRKCHP24723 683 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CD70P32970 193 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 SULT1E1P49888 294 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 SGSHP51688 502 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TPM4P67936 248 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CDR2Q01850 454 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 ZBTB16Q05516 673 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 SULT2A1Q06520 285 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 DUOXA1Q1HG43 343 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TTC31Q49AM3 519 aaPredicted RBP13.54□□□□□ -0.24
HDAC1-203ENST00000463172 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TMEM215Q68D42 235 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 NOP9Q86U38 636 aaKnown RBP13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CFAP52Q8N1V2 620 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 AOPEPQ8N6M6 819 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CYB5D2Q8WUJ1 264 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TTC17Q96AE7 1141 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 ERLEC1Q96DZ1 483 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 RPRD1AQ96P16 312 aaPredicted RBP13.54□□□□□ -0.24
HDAC1-203ENST00000463172 NUP58Q9BVL2 599 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 WDCPQ9H6R7 721 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CD248Q9HCU0 757 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
HDAC1-203ENST00000463172 CNOT1A5YKK6 2376 aaKnown RBP13.54□□□□□ -0.24
HDAC1-203ENST00000463172 TNRC6BQ9UPQ9 1833 aaKnown RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 MEI4A8MW99 385 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 GDF9O60383 454 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 DNTTP04053 509 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 MMEP08473 750 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ZNF18P17022 549 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 DESP17661 470 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 CSKP41240 450 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 NSFP46459 744 aaKnown RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ATXN3P54252 364 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 NOMO3P69849 1222 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 EIF4EBP2Q13542 120 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 CAMK2GQ13555 558 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 SLC25A52Q3SY17 297 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 CAVIN1Q6NZI2 390 aaKnown RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 LRRC31Q6UY01 552 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ARCQ7LC44 396 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 RGL4Q8IZJ4 473 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 PGAP3Q96FM1 320 aaPredicted RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 TMEM9BQ9NQ34 198 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 USP36Q9P275 1121 aaKnown RBP13.53□□□□□ -0.24
HDAC1-203ENST00000463172 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 SIK3Q9Y2K2 1263 aa13.53□□□□□ -0.24
HDAC1-203ENST00000463172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 GOLGA8SH3BPF8 625 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 CLDN11O75508 207 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 CFIP05156 583 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 HLA-EP13747 358 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PTGER3P43115 390 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 JAM2P57087 298 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF177Q13360 481 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 FRMD1Q8N878 549 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 WFDC5Q8TCV5 224 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 HSPA12BQ96MM6 686 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 NPY6RQ99463 290 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 MKRN2Q9H000 416 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms