RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 MSRB1Q9NZV6 116 aa4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 SLC12A4Q9UP95 1085 aa4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 CNTN6Q9UQ52 1028 aa4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 DAAM1Q9Y4D1 1078 aa4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 HS3ST3B1Q9Y662 390 aa4.49□□□□□ -1.69
CHAMP1-202ENST00000463003 TRBV5-3A0A0A0MS03 114 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 A0A0G2JK05 382 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 SLC38A8A6NNN8 435 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ZNF814B7Z6K7 855 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 F8W810 466 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 SYT5O00445 386 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 SKAP2O75563 359 aaPredicted RBP4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 OAZ2O95190 189 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 SGPL1O95470 568 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 IGFBP2P18065 325 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 TNFRSF1BP20333 461 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ME1P48163 572 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 RGS19P49795 217 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 LINC00205P59089 165 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 B4GALNT1Q00973 533 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 BRD3Q15059 726 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ZACNQ401N2 412 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 KIAA1161Q6NSJ0 714 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 C1orf228Q6PIY5 440 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 SPICE1Q8N0Z3 855 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ATG16L2Q8NAA4 619 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 VPS37AQ8NEZ2 397 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 OR52N4Q8NGI2 321 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 CLEC4CQ8WTT0 213 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 HMGB4Q8WW32 186 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 EME1Q96AY2 570 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 VCPIP1Q96JH7 1222 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 MARK4Q96L34 752 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 TRMOQ9BU70 441 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 AAMDCQ9H7C9 122 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ERVK-5Q9HDB9 667 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 PLCB1Q9NQ66 1216 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 PAPOLBQ9NRJ5 636 aaKnown RBP4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 TAGLN3Q9UI15 199 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 COG5Q9UP83 839 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 LZTS1Q9Y250 596 aa4.48□□□□□ -1.69
CHAMP1-202ENST00000463003 ACKR2O00590 384 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 TLX3O43711 291 aaPredicted RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 WNT1P04628 370 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 CYP3A4P08684 503 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 ALDOCP09972 364 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 PSG1P11464 419 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 TGM2P21980 687 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 KIAA1755Q5JYT7 1200 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 SCAMP5Q8TAC9 235 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 MSI2Q96DH6 328 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 MPHOSPH6Q99547 160 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 RTKNQ9BST9 563 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 TUBB6Q9BUF5 446 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 SORBS1Q9BX66 1292 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 THSD1Q9NS62 852 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 IPO11Q9UI26 975 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 UTS2RQ9UKP6 389 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 AGO2Q9UKV8 859 aaKnown RBP4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 NFU1Q9UMS0 254 aa4.47□□□□□ -1.69
CHAMP1-202ENST00000463003 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3DA0A087WVF3 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3IA0A087WXS9 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3KA0A087X1G2 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3BA6NDS4 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3FA6NER0 549 aaPredicted RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 AGAP5A6NIR3 686 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 C3orf70A6NLC5 250 aaPredicted RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3LB9A6J9 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 F5H423 210 aaPredicted RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 ACTL6BO94805 426 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 FGF2P09038 288 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3HP0C7X1 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 CYP3A7P24462 503 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 SERPINF1P36955 418 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 PNLIPRP1P54315 467 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 RBM6P78332 1123 aaKnown RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 ICA1Q05084 483 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 LEXMQ3ZCV2 418 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 ZNF569Q5MCW4 686 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3GQ6DHY5 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3CQ6IPX1 549 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 TBC1D3Q8IZP1 549 aaPredicted RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 MMP21Q8N119 569 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 PAQR4Q8N4S7 273 aaPredicted RBP4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 FAM47BQ8NA70 645 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 SMRP1Q8NCR6 262 aa4.46□□□□□ -1.7
CHAMP1-202ENST00000463003 SLC44A5Q8NCS7 719 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms