RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
SKA3-204ENST00000462482 ZFHX4Q86UP3 3567 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 GON4LQ3T8J9 2241 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 ASCC3Q8N3C0 2202 aaKnown RBP15.95■□□□□ 0.14
SKA3-204ENST00000462482 MYH10P35580 1976 aa15.95■□□□□ 0.14
SKA3-204ENST00000462482 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 RNF225M0QZC1 329 aaPredicted RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 TNFSF14O43557 240 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 RNASEH2AO75792 299 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 FGFR1OPO95684 399 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 AFPP02771 609 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 SRPRAP08240 638 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 C7P10643 843 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 RPS24P62847 133 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 RACK1P63244 317 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 CST6Q15828 149 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 MS4A13Q5J8X5 152 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 FOXR2Q6PJQ5 311 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 DBX2Q6ZNG2 339 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 CHSY1Q86X52 802 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 ELOA2Q8IYF1 753 aaPredicted RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 GALNT15Q8N3T1 639 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 FCRL2Q96LA5 508 aaPredicted RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 PRICKLE1Q96MT3 831 aaPredicted RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 MED15Q96RN5 788 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 ZSWIM1Q9BR11 485 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 MAN1B1Q9UKM7 699 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 TPX2Q9ULW0 747 aaKnown RBP15.94■□□□□ 0.14
SKA3-204ENST00000462482 ERVW-1Q9UQF0 538 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 NAALADL1Q9UQQ1 740 aa15.94■□□□□ 0.14
SKA3-204ENST00000462482 IGF2RP11717 2491 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 MYO18AQ92614 2054 aaKnown RBP15.93■□□□□ 0.14
SKA3-204ENST00000462482 EDDM13A0A1B0GTR0 161 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 SIN3BO75182 1162 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 GABBR2O75899 941 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 LUC7L3O95232 432 aaKnown RBP15.93■□□□□ 0.14
SKA3-204ENST00000462482 KCNH2Q12809 1159 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 CCDC157Q569K6 752 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 DCAF6Q58WW2 860 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 SLC45A4Q5BKX6 768 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 PITRM1Q5JRX3 1037 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 NADSYN1Q6IA69 706 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 TTI2Q6NXR4 508 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 BEND5Q7L4P6 421 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 LGI2Q8N0V4 545 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 CFAP52Q8N1V2 620 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 BAHD1Q8TBE0 780 aaPredicted RBP15.93■□□□□ 0.14
SKA3-204ENST00000462482 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 STK32AQ8WU08 396 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 BTN2A3PQ96KV6 586 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 FAM81BQ96LP2 452 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 INTS2Q9H0H0 1204 aaKnown RBP15.93■□□□□ 0.14
SKA3-204ENST00000462482 NUCKS1Q9H1E3 243 aaKnown RBP15.93■□□□□ 0.14
SKA3-204ENST00000462482 MTG2Q9H4K7 406 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 AASDHPPTQ9NRN7 309 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 CTNND2Q9UQB3 1225 aa15.93■□□□□ 0.14
SKA3-204ENST00000462482 F5H5T6 163 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 PCDHGA12O60330 932 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 ADH1BP00325 375 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 CALCAP01258 141 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 ATXN1LP0C7T5 689 aaKnown RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 SLC2A3P11169 496 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 CD44P16070 742 aaKnown RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 SLC8A1P32418 973 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 CTSKP43235 329 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 GPD2P43304 727 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 OXCT1P55809 520 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 YWHAZP63104 245 aaKnown RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 ECT2LQ008S8 904 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 PAK1Q13153 545 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 SLC12A1Q13621 1099 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 ARID5BQ14865 1188 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 MEA1Q16626 185 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 ENOSF1Q7L5Y1 443 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 TMPRSS7Q7RTY8 843 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 TAC4Q86UU9 113 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 MMAAQ8IVH4 418 aaKnown RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 TRIM59Q8IWR1 403 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 ATP6V0D2Q8N8Y2 350 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 OR2T34Q8NGX1 318 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 LMO3Q8TAP4 145 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 RNF34Q969K3 372 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 SLC39A13Q96H72 371 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 PPP1R9BQ96SB3 815 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 POPDC2Q9HBU9 364 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 UBE2TQ9NPD8 197 aaPredicted RBP15.92■□□□□ 0.14
SKA3-204ENST00000462482 FTSJ1Q9UET6 329 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 FZD4Q9ULV1 537 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 CACNA1EQ15878 2313 aa15.92■□□□□ 0.14
SKA3-204ENST00000462482 A0A1W2PP55 124 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 A0A1W2PPC4 97 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 H0Y8X5 98 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 KCNK3O14649 394 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 VILLO15195 856 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 MID1O15344 667 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 THAP12O43422 761 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 FYNP06241 537 aa15.91■□□□□ 0.14
SKA3-204ENST00000462482 ABCB4P21439 1286 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms