RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TMEM174Q8WUU8 243 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CD101Q93033 1021 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CCDC127Q96BQ5 260 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ITPKCQ96DU7 683 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 RMDN2Q96LZ7 410 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 UROC1Q96N76 676 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PPP1R10Q96QC0 940 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 BPIFA3Q9BQP9 254 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PI4K2AQ9BTU6 479 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM5Q9C035 493 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 SMG9Q9H0W8 520 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TASP1Q9H6P5 420 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PDE11AQ9HCR9 933 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 HOMER3Q9NSC5 361 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ANO10Q9NW15 660 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CNTN3Q9P232 1028 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 AFF4Q9UHB7 1163 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 RWDD2AQ9UIY3 292 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 FBXL5Q9UKA1 691 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 MAFFQ9ULX9 164 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 UBQLN1Q9UMX0 589 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 DERAQ9Y315 318 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PRKAB1Q9Y478 270 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PLXND1Q9Y4D7 1925 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GOLGA6CA6NDK9 693 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GOLGA6BA6NDN3 693 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ANTXRLA6NF34 631 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ENO4A6NNW6 628 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 USP27XA6NNY8 438 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PLK4O00444 970 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 DNAJC6O75061 913 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TNNC2P02585 160 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 NFICP08651 508 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TMEM191BP0C7N4 346 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GOLGA6DP0CG33 693 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PNMA6AP0CW24 399 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 EPB41P11171 864 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 SKILP12757 684 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GP1BBP13224 206 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 KRT13P13646 458 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 HNRNPLP14866 589 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ARSAP15289 507 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TNNI1P19237 187 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GABRR2P28476 465 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 RPL9P32969 192 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 CASP4P49662 377 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 RHDQ02161 417 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ZNF33AQ06730 810 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 CYP24A1Q07973 514 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PSMD6Q15008 389 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 CRY1Q16526 586 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 UPP1Q16831 310 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PLEKHG6Q3KR16 790 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 CTXN3Q4LDR2 81 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ARHGAP15Q53QZ3 475 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 E4F1Q66K89 784 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TTI2Q6NXR4 508 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 FBXL19Q6PCT2 694 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 FOXR2Q6PJQ5 311 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 INTS8Q75QN2 995 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 DNAJB7Q7Z6W7 309 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 FILIP1Q7Z7B0 1213 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 WDR49Q8IV35 697 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 C1orf127Q8N9H9 656 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 DRAXINQ8NBI3 349 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 BEST2Q8NFU1 509 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 MIPOL1Q8TD10 442 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 C18orf25Q96B23 403 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ZMAT2Q96NC0 199 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 CRACR2AQ9BSW2 395 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 SRRTQ9BXP5 876 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 SLC46A2Q9BY10 475 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM55Q9BYV6 548 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 IQCGQ9H095 443 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 NAT10Q9H0A0 1025 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GOLGA2P5Q9HBQ8 144 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 DMAC2Q9NW81 257 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 DPP3Q9NY33 737 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 GOLGA6AQ9NYA3 693 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ANKMY1Q9P2S6 941 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 TUBGCP4Q9UGJ1 667 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 MMP17Q9ULZ9 603 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 C2CD2Q9Y426 696 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 ITPR3Q14573 2671 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 MYLKQ15746 1914 aa6.29□□□□□ -1.4
SMARCC1-204ENST00000462198 A0A1W2PP55 124 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 K7EQS6 105 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 PODXLO00592 558 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 MAPK13O15264 365 aa6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SLC16A3O15427 465 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-204ENST00000462198 FGF19O95750 216 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms