RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 CD38P28907 300 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 EPHA8P29322 1005 aaPredicted RBP11.28□□□□□ -0.6
CBX3-205ENST00000462165 GTF2H1P32780 548 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 ME1P48163 572 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 CCR5P51681 352 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 ILKQ13418 452 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 CST6Q15828 149 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 HNRNPA1L2Q32P51 320 aaKnown RBP11.28□□□□□ -0.6
CBX3-205ENST00000462165 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 KRT39Q6A163 491 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 NCEH1Q6PIU2 408 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 FAM186BQ8IYM0 893 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 CACTIN-AS1Q8N1I8 211 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 OXR1Q8N573 874 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 EID2Q8N6I1 236 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 OR2T34Q8NGX1 318 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 GANCQ8TET4 914 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 RNF139Q8WU17 664 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 SEMA4DQ92854 862 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 GDF3Q9NR23 364 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 TSPAN16Q9UKR8 245 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 FZD4Q9ULV1 537 aa11.28□□□□□ -0.6
CBX3-205ENST00000462165 TPX2Q9ULW0 747 aaKnown RBP11.28□□□□□ -0.6
CBX3-205ENST00000462165 A0A1W2PP55 124 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 YJEFN3A6XGL0 299 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 E7ENQ6 273 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 CAPN9O14815 690 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 WNT9AO14904 365 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MID1O15344 667 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MSI1O43347 362 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MYL1P05976 194 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 RXRGP48443 463 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 NXPH1P58417 271 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 ADIGQ0VDE8 80 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 BST2Q10589 180 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 FAM133BQ5BKY9 247 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MSANTD2Q6P1R3 559 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 RFWD3Q6PCD5 774 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 GPR155Q7Z3F1 870 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 ZNF605Q86T29 641 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MFN1Q8IWA4 741 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 UNC45BQ8IWX7 931 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 SCML4Q8N228 414 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 ZNF843Q8N446 348 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 FBXL13Q8NEE6 735 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 FIBINQ8TAL6 211 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 RFFLQ8WZ73 363 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 EDEM1Q92611 657 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 FGF11Q92914 225 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 TATDN2Q93075 761 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 AZIN2Q96A70 460 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 MRGPRX3Q96LB0 322 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 ERVMER34-1Q9H9K5 563 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 CNGB3Q9NQW8 809 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 RAB20Q9NX57 234 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 INTS6Q9UL03 887 aaKnown RBP11.27□□□□□ -0.61
CBX3-205ENST00000462165 DOCK9Q9BZ29 2069 aa11.27□□□□□ -0.61
CBX3-205ENST00000462165 ZNF462Q96JM2 2506 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 GOLGA6L7A0A1B0GV03 622 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 TLR4O00206 839 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 BRINP1O60477 761 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 ACSL4O60488 711 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 RNASEH2AO75792 299 aaKnown RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 SRPRAP08240 638 aaKnown RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 RPL13P26373 211 aaKnown RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 SLC6A4P31645 630 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 SLC8A1P32418 973 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 CSKP41240 450 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 SLC11A2P49281 568 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 DAOAP59103 153 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 BNIP3Q12983 259 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 SGO2Q562F6 1265 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 SLC45A4Q5BKX6 768 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 C9orf64Q5T6V5 341 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 NUGGCQ68CJ6 796 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 PCSK4Q6UW60 755 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.61
CBX3-205ENST00000462165 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 MMAAQ8IVH4 418 aaKnown RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 DHX40Q8IX18 779 aaKnown RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
CBX3-205ENST00000462165 HJURPQ8NCD3 748 aaPredicted RBP11.26□□□□□ -0.61
CBX3-205ENST00000462165 KCTD13Q8WZ19 329 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms