RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 SCML1Q9UN30 329 aa13.72□□□□□ -0.21
UBA3-205ENST00000461934 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 E5RJQ4 531 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 F5H5T6 163 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 FSBPO95073 299 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 LUC7L3O95232 432 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 ABCB4P21439 1286 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 ACSL1P33121 698 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 CSKP41240 450 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 RPS24P62847 133 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 CAMK4Q16566 473 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 MEA1Q16626 185 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 PTPRNQ16849 979 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 MS4A13Q5J8X5 152 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 NADSYN1Q6IA69 706 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 TRIM65Q6PJ69 517 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 BTN2A3PQ96KV6 586 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 CAMK1GQ96NX5 476 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 OMDQ99983 421 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 THAP9Q9H5L6 903 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 FAM204AQ9H8W3 233 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 SGK2Q9HBY8 427 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 TM7SF3Q9NS93 570 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 RWDD2AQ9UIY3 292 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 ZMIZ1Q9ULJ6 1067 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
UBA3-205ENST00000461934 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
UBA3-205ENST00000461934 KMT2BQ9UMN6 2715 aaPredicted RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 SYNJ2BP-COX16A0A087WUM0 186 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 TRUB2O95900 331 aaKnown RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 SRPRAP08240 638 aaKnown RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 SLC2A3P11169 496 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 TACR2P21452 398 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 CSNK1EP49674 416 aaKnown RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 UBE2HP62256 183 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 CDK17Q00537 523 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 PTK2Q05397 1052 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 EXOC3L4Q17RC7 722 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 PITRM1Q5JRX3 1037 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 BEND5Q7L4P6 421 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 SKA1Q96BD8 255 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 PDCL3Q9H2J4 239 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBA3-205ENST00000461934 COX16Q9P0S2 106 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 KIAA1468Q9P260 1216 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 KLK13Q9UKR3 277 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 ERVW-1Q9UQF0 538 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.7□□□□□ -0.22
UBA3-205ENST00000461934 MSRB2Q9Y3D2 182 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 MYLKQ15746 1914 aa13.7□□□□□ -0.22
UBA3-205ENST00000461934 EDDM13A0A1B0GTR0 161 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 FLRT2O43155 660 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 PAPSS1O43252 624 aaPredicted RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 GJB3O75712 270 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 FYNP06241 537 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 ZNF883P0CG24 379 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 SLC9A1P19634 815 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 KRT9P35527 623 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 RPL34P49207 117 aaKnown RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 C21orf59P57076 290 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 FAM193AP78312 1265 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 ECT2LQ008S8 904 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 PDCLQ13371 301 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 HLA-BQ31612 363 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 ZC3H12AQ5D1E8 599 aaKnown RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 EFHC1Q5JVL4 640 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 RABGAP1LQ5R372 815 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 TTC39BQ5VTQ0 682 aaPredicted RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 GJB7Q6PEY0 223 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 USP30Q70CQ3 517 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 CHCHD4Q8N4Q1 142 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 TTC17Q96AE7 1141 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 BIRC7Q96CA5 298 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 SLC39A13Q96H72 371 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 SLC4A5Q9BY07 1137 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 RSPH9Q9H1X1 276 aaPredicted RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 PABPC3Q9H361 631 aaKnown RBP13.69□□□□□ -0.22
UBA3-205ENST00000461934 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 WASF3Q9UPY6 502 aa13.69□□□□□ -0.22
UBA3-205ENST00000461934 A0A1W2PP55 124 aa13.68□□□□□ -0.22
UBA3-205ENST00000461934 TARSL2A2RTX5 802 aaKnown RBP13.68□□□□□ -0.22
UBA3-205ENST00000461934 LRRC72A6NJI9 287 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms