RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CIR1Q86X95 450 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 REXO1L1PQ8IX06 675 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 FAM71BQ8TC56 605 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 TEKT4Q8WW24 435 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 EZH1Q92800 747 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 CD101Q93033 1021 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 RPRD1AQ96P16 312 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 KCTD15Q96SI1 283 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 TSGA10Q9BZW7 698 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 MPP6Q9NZW5 540 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 STIM2Q9P246 746 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 PPARGC1AQ9UBK2 798 aaKnown RBP11.63□□□□□ -0.55
SSBP1-202ENST00000461433 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 TTC28Q96AY4 2481 aa11.63□□□□□ -0.55
SSBP1-202ENST00000461433 F5P12259 2224 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 A0A0A0MRY4 1105 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 KRT86O43790 486 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 LUC7L3O95232 432 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PDGFBP01127 241 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 HOXC13P31276 330 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 SSR1P43307 286 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 FZD5Q13467 585 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PON2Q15165 354 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 DPYSL2Q16555 572 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 HADHQ16836 314 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 TMEM196Q5HYL7 178 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 RABGAP1LQ5R372 815 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 TTC39BQ5VTQ0 682 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 LRRC31Q6UY01 552 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 POLNQ7Z5Q5 900 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 DAAM2Q86T65 1068 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 NLRP14Q86W24 1093 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 SFTPA1Q8IWL2 248 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CCAR2Q8N163 923 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 OR52K2Q8NGK3 314 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 FIBINQ8TAL6 211 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 FAM3CQ92520 227 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 TSC1Q92574 1164 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 HSPH1Q92598 858 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 MSANTD3Q96H12 275 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 P2RY13Q9BPV8 354 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 SLC2A11Q9BYW1 496 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 EPHX3Q9H6B9 360 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 LZTFL1Q9NQ48 299 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 DNAJC17Q9NVM6 304 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 GUCA1BQ9UMX6 200 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 MTF2Q9Y483 593 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CHD5Q8TDI0 1954 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 A0A1B0GVM2 712 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 ANTXRLA6NF34 631 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 TCAF2A6NFQ2 919 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CREB3O43889 395 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PALMO75781 387 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CD48P09326 243 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 IL4RP24394 825 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 HLA-FP30511 346 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CDH4P55283 916 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 AMPD2Q01433 879 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 LRRC38Q5VT99 294 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 FSTL4Q6MZW2 842 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CXorf57Q6NSI4 855 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF852Q6ZMS4 543 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CHST9Q7L1S5 443 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 KIAA1524Q8TCG1 905 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 SHDQ96IW2 340 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PNKPQ96T60 521 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 ZYG11BQ9C0D3 744 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PCDH18Q9HCL0 1135 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 CWC15Q9P013 229 aaKnown RBP11.62□□□□□ -0.55
SSBP1-202ENST00000461433 DEC1Q9P2X7 70 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 TBC1D30Q9Y2I9 924 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 SLC27A6Q9Y2P4 619 aa11.62□□□□□ -0.55
SSBP1-202ENST00000461433 KANSL1LA0AUZ9 987 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TYW5A2RUC4 315 aaKnown RBP11.61□□□□□ -0.55
SSBP1-202ENST00000461433 USP27XA6NNY8 438 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 K7EQS6 105 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 SPOPO43791 374 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 CLDN11O75508 207 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 KRT7P08729 469 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 GOT1P17174 413 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TARSP26639 723 aaKnown RBP11.61□□□□□ -0.55
SSBP1-202ENST00000461433 CD70P32970 193 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 HCAR3P49019 387 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 DGKGP49619 791 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 KDSRQ06136 332 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 PPP6R3Q5H9R7 873 aaPredicted RBP11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms