RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 PLCB1Q9NQ66 1216 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 TRPV5Q9NQA5 729 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 XPNPEP1Q9NQW7 623 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 TDP1Q9NUW8 608 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 SETD4Q9NVD3 440 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 COMMD8Q9NX08 183 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 DCAF16Q9NXF7 216 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 TRMT1Q9NXH9 659 aaKnown RBP5.33□□□□□ -1.56
SF3A3-202ENST00000460925 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 HDAC6Q9UBN7 1215 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 MAGEL2Q9UJ55 1249 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 CROTQ9UKG9 612 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 DAAM1Q9Y4D1 1078 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 TRIP11Q15643 1979 aa5.33□□□□□ -1.56
SF3A3-202ENST00000460925 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ARHGEF35A5YM69 484 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 KBTBD13C9JR72 458 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 HAS3O00219 553 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 DAPK3O43293 454 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 MGEA5O60502 916 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 KINO60870 393 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 GASTP01350 101 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TFRCP02786 760 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 VTNP04004 478 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 SETSIPP0DME0 302 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 MYF5P13349 255 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 INSRRP14616 1297 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 HNRNPLP14866 589 aaKnown RBP eCLIP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 EN2P19622 333 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CRHR1P34998 444 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ACLYP53396 1101 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 EPHB3P54753 998 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ASIC1P78348 528 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 PPFIA1Q13136 1202 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TARDBPQ13148 414 aaKnown RBP eCLIP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 MAPK7Q13164 816 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 EMC2Q15006 297 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 XKR3Q5GH77 459 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 AGAP9Q5VTM2 703 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 RINT1Q6NUQ1 792 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CCBE1Q6UXH8 406 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 SRLQ86TD4 932 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 REXO1L1PQ8IX06 675 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 C4orf19Q8IY42 314 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CEP57L1Q8IYX8 460 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 SAMD14Q8IZD0 417 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 DAW1Q8N136 415 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 APPL2Q8NEU8 664 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 AFAP1L1Q8TED9 768 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ATP8B4Q8TF62 1192 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ZNF480Q8WV37 535 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 LPPQ93052 612 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TMEM143Q96AN5 459 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 VMP1Q96GC9 406 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 PAGE5Q96GU1 130 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 APIPQ96GX9 242 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ZC3H10Q96K80 434 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC43Q96MW1 224 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TIGD1Q96MW7 591 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CTAGE1Q96RT6 745 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 REEP2Q9BRK0 252 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 MTG1Q9BT17 334 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 NT5C3AQ9H0P0 336 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 FAM49AQ9H0Q0 323 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 CLSTN2Q9H4D0 955 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 SMARCAD1Q9H4L7 1026 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ATP6V0A4Q9HBG4 840 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ERAP1Q9NZ08 941 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TBC1D7Q9P0N9 293 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 TRPS1Q9UHF7 1281 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ZNF215Q9UL58 517 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-202ENST00000460925 OGDHLQ9ULD0 1010 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 LZTS1Q9Y250 596 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 PCDHGB6Q9Y5F9 930 aa5.32□□□□□ -1.56
SF3A3-202ENST00000460925 ADGRA3Q8IWK6 1321 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 ABHD14A-ACY1A0A1B0GW23 586 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 RASA4BC9J798 803 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 H0YHG0 523 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 FOXN3O00409 490 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 PHGDHO43175 533 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 MTSS1O43312 755 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 RASA4O43374 803 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 KLRC4O43908 158 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 HBP1O60381 514 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 B4GALT4O60513 344 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 PRAMEF4O60810 478 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CSDE1O75534 798 aaKnown RBP5.31□□□□□ -1.56
SF3A3-202ENST00000460925 LYPLA2O95372 231 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 SGPL1O95470 568 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 C22orf31O95567 290 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 MBD3O95983 291 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 EDN1P05305 212 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 FTH1P19P0C7X4 201 aa5.31□□□□□ -1.56
SF3A3-202ENST00000460925 CYP2C9P11712 490 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms