RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PYGMP11217 842 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 HNRNPLP14866 589 aaKnown RBP eCLIP4.37□□□□□ -1.711e-9■□□□□ 8.8
ECHDC1-211ENST00000460558 ARSAP15289 507 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 FOSL1P15407 271 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 FSTP19883 344 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 AKAP5P24588 427 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TKTP29401 623 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 EPHB3P54753 998 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 CLDN6P56747 220 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 CORO7P57737 925 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 KRT85P78386 507 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ITKQ08881 620 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 KCNMA1Q12791 1236 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 FAPQ12884 760 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 BFSP1Q12934 665 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 PIN1Q13526 163 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TARBP2Q15633 366 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ARHGAP44Q17R89 818 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 NKAPLQ5M9Q1 402 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 EOGTQ5NDL2 527 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TSHZ3Q63HK5 1081 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 GAREM2Q75VX8 874 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ZC3H18Q86VM9 953 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 PLA2G4DQ86XP0 818 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 CPNE8Q86YQ8 564 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 LSMEM2Q8N112 164 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ALLCQ8N6M5 410 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF419Q96HQ0 510 aaPredicted RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 SEMA3CQ99985 751 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 SLC13A1Q9BZW2 595 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TASP1Q9H6P5 420 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 KIF9Q9HAQ2 790 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 SMURF1Q9HCE7 757 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TCF7L1Q9HCS4 588 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 SPTLC3Q9NUV7 552 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 AFF4Q9UHB7 1163 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 YIPF1Q9Y548 306 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 APCP25054 2843 aa4.37□□□□□ -1.71
ECHDC1-211ENST00000460558 TCHHQ07283 1943 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 NBEAL1Q6ZS30 2694 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 IGHV1OR15-9A0A0B4J2B8 117 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 MEI4A8MW99 385 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 FADS2P1A8MWK0 482 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 K7EQS6 105 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 SGK1O00141 431 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF213O14771 459 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 PCDHGA12O60330 932 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 TSPAN1O60635 241 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 KLF8O95600 359 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 SCGB1D2O95969 90 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 FOSP01100 380 aaPredicted RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 AMY2AP04746 511 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 SRGAP2CP0DJJ0 459 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ITGB6P18564 788 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 AMY2BP19961 511 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 GLDCP23378 1020 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 GABRR2P28476 465 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 AVPR1AP37288 418 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 BCL6P41182 706 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ERVPABLB-1P60509 514 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 IL2P60568 153 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 PHC1P78364 1004 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 EGR3Q06889 387 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 PPP2R5AQ15172 486 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 MSMPQ1L6U9 139 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ATP13A4Q4VNC1 1196 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 NXNQ6DKJ4 435 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZPBP2Q6X784 338 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CREG2Q8IUH2 290 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CMTM8Q8IZV2 173 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZCCHC9Q8N567 271 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 IL17RCQ8NAC3 791 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 TXNDC5Q8NBS9 432 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 PLEKHO2Q8TD55 490 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CHTF18Q8WVB6 975 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 PSPC1Q8WXF1 523 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ATP2A3Q93084 1043 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CPB2Q96IY4 423 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 SCYL1Q96KG9 808 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 GCNAQ96QF7 691 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF577Q9BSK1 485 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 MTA3Q9BTC8 594 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 SPZ1Q9BXG8 430 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 KRT23Q9C075 422 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 MINDY3Q9H8M7 445 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ECT2Q9H8V3 914 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 HELLSQ9NRZ9 838 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 OXSMQ9NWU1 459 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 TNFRSF10DQ9UBN6 386 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZC3H7BQ9UGR2 993 aaKnown RBP4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 CLCA2Q9UQC9 943 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ZKSCAN5Q9Y2L8 839 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 NFE2L3Q9Y4A8 694 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ASB3Q9Y575 518 aa4.36□□□□□ -1.71
ECHDC1-211ENST00000460558 ARHGEF17Q96PE2 2063 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms