RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SLC7A6OSQ96CW6 309 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 OLFM3Q96PB7 478 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 KCTD15Q96SI1 283 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 RHOBTB2Q9BYZ6 727 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SHCBP1LQ9BZQ2 653 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 BEST1O76090 585 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 PFKMP08237 780 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SPATA31D3P0C874 917 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 TGM2P21980 687 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 BDNFP23560 247 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 PDK4Q16654 411 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 CGB2Q6NT52 195 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SPATA31D4Q6ZUB0 917 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 HFE2Q6ZVN8 426 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 METTL23Q86XA0 190 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 RNF139Q8WU17 664 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 WDR60Q8WVS4 1066 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 NRG4Q8WWG1 115 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 MS4A4AQ96JQ5 239 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 NFKBIZQ9BYH8 718 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 MYBPHLA2RUH7 354 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 GYG2O15488 501 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TBX10O75333 385 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 HAUS5O94927 633 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ITGBL1O95965 494 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TOP3BO95985 862 aaKnown RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 PSMB4P28070 264 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 POU5F1BQ06416 359 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 INCA1Q0VD86 236 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 SLC45A4Q5BKX6 768 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 UNC93AQ86WB7 457 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 LRRC52Q8N7C0 313 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ZNF669Q96BR6 464 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TUBGCP5Q96RT8 1024 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 WDCPQ9H6R7 721 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TSNARE1Q96NA8 513 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 UNKQ9C0B0 810 aaKnown RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 FBXO6Q9NRD1 293 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 CLIC5Q9NZA1 410 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 PRG3Q9Y2Y8 225 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 DOCK3Q8IZD9 2030 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ERVK-10P10266 1014 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 MYL2P10916 166 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 NPR3P17342 541 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TKTP29401 623 aaKnown RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 CLCNKBP51801 687 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ALDH18A1P54886 795 aaKnown RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 TMEM110Q86TL2 294 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ALKBH8Q96BT7 664 aaKnown RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 SCYL1Q96KG9 808 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ZNF395Q9H8N7 513 aaPredicted RBP15.81■□□□□ 0.12
LMNB1-203ENST00000460265 ACTL7BQ9Y614 415 aa15.81■□□□□ 0.12
LMNB1-203ENST00000460265 JCHAINP01591 159 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ITGA2BP08514 1039 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 L1CAMP32004 1257 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 BRCC3P46736 316 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 NEK3P51956 506 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 TP53INP2Q8IXH6 220 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 RFWD2Q8NHY2 731 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 DNAJC1Q96KC8 554 aaKnown RBP15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SLC4A5Q9BY07 1137 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 BFARQ9NZS9 450 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SCN1AP35498 2009 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SMIM35A0A1B0GVV1 85 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SLC15A5A6NIM6 579 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 MFSD11O43934 449 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 PSMG1O95456 288 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 APOEP02649 317 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 CCDC166P0CW27 439 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 KCNA4P22459 653 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 GCAP28676 217 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 GRIK1P39086 918 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 MATKP42679 507 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
LMNB1-203ENST00000460265 SEPT6Q14141 434 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ACSBG2Q5FVE4 666 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 CRLF3Q8IUI8 442 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 LZICQ8WZA0 190 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 E2F7Q96AV8 911 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ADAMTS10Q9H324 1103 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 DTLQ9NZJ0 730 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 COL1A2P08123 1366 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 FAM237BA0A1B0GVD1 139 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ARHGAP42A6NI28 874 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 CHADO15335 359 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 TCEA3O75764 348 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ENO1P06733 434 aaKnown RBP15.8■□□□□ 0.12
LMNB1-203ENST00000460265 VAV1P15498 845 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 PDK1Q15118 436 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 ADGRD1Q6QNK2 874 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 IZUMO2Q6UXV1 221 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 UNC5AQ6ZN44 842 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 MARK2Q7KZI7 788 aaKnown RBP15.8■□□□□ 0.12
LMNB1-203ENST00000460265 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 RASSF3Q86WH2 238 aa15.8■□□□□ 0.12
LMNB1-203ENST00000460265 P2RY11Q96G91 374 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms