RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ATP9BO43861 1147 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ANXA9O76027 345 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 UQCRBP14927 111 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MUTP22033 750 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 AKT1P31749 480 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 GTF2H1P32780 548 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RPL26P61254 145 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 IL5RAQ01344 420 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 CNTN2Q02246 1040 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 ZNF560Q96MR9 790 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 HDHD2Q9H0R4 259 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 PCDHA10Q9Y5I2 948 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 UBDO15205 165 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MYBL2P10244 700 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TFE3P19532 575 aaPredicted RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 DRD4P21917 467 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 BCAP31P51572 246 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ACVR2BQ13705 512 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RFX4Q33E94 735 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 THOC7Q6I9Y2 204 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 FBXO36Q8NEA4 188 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ZNF75CPQ92670 426 aaPredicted RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 VPS45Q9NRW7 570 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RGS18Q9NS28 235 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 CAPN6Q9Y6Q1 641 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ADGRA2Q96PE1 1338 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MEI4A8MW99 385 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TRDMT1O14717 391 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 SHOX2O60902 331 aaPredicted RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 TNFRSF21O75509 655 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 SEC24AO95486 1093 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TFRCP02786 760 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 DNAJB2P25686 324 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 GRK4P32298 578 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TPI1P60174 286 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 FUT2Q10981 343 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 SPDYE7PQ495Y7 208 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 LRRC17Q8N6Y2 441 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TDRD5Q8NAT2 981 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 ASZ1Q8WWH4 475 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TMEM237Q96Q45 408 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MMTAG2Q9BU76 263 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 THUMPD3Q9BV44 507 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 NUAK2Q9H093 628 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 PRDM16Q9HAZ2 1276 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ZNF302Q9NR11 478 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RBAKQ9NYW8 714 aaPredicted RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 SRRDQ9UH36 339 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 POLG2Q9UHN1 485 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 RAB26Q9ULW5 256 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 UMODL1Q5DID0 1318 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 A0A1B0GUL6 1792 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 RALAP11233 206 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 PUDPQ08623 228 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 DGKDQ16760 1214 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 LIN52Q52LA3 116 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 HAUS6Q7Z4H7 955 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 FBXO16Q8IX29 292 aaPredicted RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 ADCY4Q8NFM4 1077 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 LRRC40Q9H9A6 602 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 KCNH7Q9NS40 1196 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 ERAP1Q9NZ08 941 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 GSTK1Q9Y2Q3 226 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 WBP11Q9Y2W2 641 aaKnown RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 ZBTB39O15060 712 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 CST8O60676 142 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 GP5P40197 560 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 MSLNQ13421 630 aaPredicted RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 GTF2H3Q13889 308 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 MROH9Q5TGP6 573 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 DENND5AQ6IQ26 1287 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 CTU1Q7Z7A3 348 aaKnown RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 EGFL6Q8IUX8 553 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 ACTRT2Q8TDY3 377 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 DDX50Q9BQ39 737 aaKnown RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 SMARCAD1Q9H4L7 1026 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 AGO2Q9UKV8 859 aaKnown RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 MAPRE3Q9UPY8 281 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 NDUFS3O75489 264 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 C5orf22Q49AR2 442 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 TTMPQ5BVD1 217 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 GNASQ5JWF2 1037 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 UBASH3BQ8TF42 649 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 BTBD9Q96Q07 612 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 EIF2AK1Q9BQI3 630 aaKnown RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 OSBPL10Q9BXB5 764 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 TBC1D10AQ9BXI6 508 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 RIPK3Q9Y572 518 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 BTN3A3O00478 584 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 SLC16A4O15374 487 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 SNAPC5O75971 98 aa9.97□□□□□ -0.81
UFD1-205ENST00000459854 FARP2O94887 1054 aaPredicted RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 HOXB8P17481 243 aaPredicted RBP9.97□□□□□ -0.81
UFD1-205ENST00000459854 ATP6V1B2P21281 511 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms