RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 CTNND2Q9UQB3 1225 aa11.69□□□□□ -0.54
RPSA-204ENST00000458478 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
RPSA-204ENST00000458478 SNX11Q9Y5W9 270 aa11.69□□□□□ -0.54
RPSA-204ENST00000458478 BICDL2A1A5D9 508 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 TAF4O00268 1085 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 SIN3BO75182 1162 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 FSBPO95073 299 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 GNA14O95837 355 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 AFPP02771 609 aaKnown RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 CSKP41240 450 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 ACADSBP45954 432 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 MARSP56192 900 aaKnown RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 BECN1Q14457 450 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 DCAF6Q58WW2 860 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 ZNF776Q68DI1 518 aaPredicted RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 BEND5Q7L4P6 421 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 TMEM110Q86TL2 294 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 HJURPQ8NCD3 748 aaPredicted RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 RHBDD1Q8TEB9 315 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 STK32AQ8WU08 396 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 ZNF606Q8WXB4 792 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 FAM149B1Q96BN6 582 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 SERPINB11Q96P15 392 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 ORAI3Q9BRQ5 295 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 INTS2Q9H0H0 1204 aaKnown RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 SGK2Q9HBY8 427 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 OSGEPQ9NPF4 335 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 ACP6Q9NPH0 428 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 KIAA1522Q9P206 1035 aaPredicted RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 XPO7Q9UIA9 1087 aaKnown RBP11.68□□□□□ -0.54
RPSA-204ENST00000458478 ANKRD6Q9Y2G4 727 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54not detected■■□□□ 11.8
RPSA-204ENST00000458478 KNL1Q8NG31 2342 aa11.68□□□□□ -0.54
RPSA-204ENST00000458478 PLXNB3Q9ULL4 1909 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 CAPN9O14815 690 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 MOCS2O96007 188 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 ASLP04424 464 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 IGHV4-34P06331 123 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 KRT5P13647 590 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 CD27P26842 260 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 CTSOP43234 321 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 NNTQ13423 1086 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 TAF5Q15542 800 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 TEAD4Q15561 434 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 ZC3H12AQ5D1E8 599 aaKnown RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 PITRM1Q5JRX3 1037 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 KCNT1Q5JUK3 1230 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 C9orf64Q5T6V5 341 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 CCNI2Q6ZMN8 369 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 TAC4Q86UU9 113 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 DHX40Q8IX18 779 aaKnown RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 APCDD1Q8J025 514 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 BAHD1Q8TBE0 780 aaPredicted RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 FAM129BQ96TA1 746 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 TOR4AQ9NXH8 423 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 FBXL12Q9NXK8 326 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 SERGEFQ9UGK8 458 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 SLCO3A1Q9UIG8 710 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 ERVW-1Q9UQF0 538 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 APOBEC2Q9Y235 224 aaKnown RBP11.67□□□□□ -0.54
RPSA-204ENST00000458478 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 BTBD3Q9Y2F9 522 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 PCDHGB2Q9Y5G2 931 aa11.67□□□□□ -0.54
RPSA-204ENST00000458478 TYW5A2RUC4 315 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 FAM47DPA6NHR8 397 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 TTC34A8MYJ7 566 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 E5RJQ4 531 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 MID1O15344 667 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 MED7O43513 233 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 RNASEH1O60930 286 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 LUC7L3O95232 432 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 TRUB2O95900 331 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 ATXN1LP0C7T5 689 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 TACR2P21452 398 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 GRIA4P48058 902 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 GALCP54803 685 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 YWHAZP63104 245 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 SCAPQ12770 1279 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 PAK1Q13153 545 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 EIF4EBP2Q13542 120 aaPredicted RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 CDH18Q13634 790 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 SUZ12Q15022 739 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 RAP1GAP2Q684P5 730 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 KIAA0895LQ68EN5 471 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 LAYNQ6UX15 382 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 USP30Q70CQ3 517 aa11.66□□□□□ -0.54
RPSA-204ENST00000458478 MMAAQ8IVH4 418 aaKnown RBP11.66□□□□□ -0.54
RPSA-204ENST00000458478 CCDC117Q8IWD4 279 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms