RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CDKL2Q92772 493 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 INPP5DQ92835 1189 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 HDAC11Q96DB2 347 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 PKMYT1Q99640 499 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 DSEQ9UL01 958 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 SNX10Q9Y5X0 201 aa17.13■□□□□ 0.33
CCDC43-202ENST00000457422 M0QZQ0 153 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 MTSS1O43312 755 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 GRIK3Q13003 919 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 CRYMQ14894 314 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 CD300LGQ6UXG3 332 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 BEND5Q7L4P6 421 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 METTL23Q86XA0 190 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 RFWD2Q8NHY2 731 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 HASPINQ8TF76 798 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 PGBD4Q96DM1 585 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 SIRPGQ9P1W8 387 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 CASP8AP2Q9UKL3 1982 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 KCNK1O00180 336 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 B3GAT3O94766 335 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 ASGR1P07306 291 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 MX2P20592 715 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 FLT3LGP49771 235 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 GALNT2Q10471 571 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 STXBP5Q5T5C0 1151 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 MROH9Q5TGP6 573 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 BSPRYQ5W0U4 402 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 PID1Q7Z2X4 250 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 NDUFAF2Q8N183 169 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 NPWQ8N729 165 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 TMEM237Q96Q45 408 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 EPAS1Q99814 870 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 GORASP1Q9BQQ3 440 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 WDCPQ9H6R7 721 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-202ENST00000457422 XPNPEP3Q9NQH7 507 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 SAR1AQ9NR31 198 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 KLHL8Q9P2G9 620 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-202ENST00000457422 SLC17A6Q9P2U8 582 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
CCDC43-202ENST00000457422 ERI2A8K979 691 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TRAFD1O14545 582 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 CA12O43570 354 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 AP2A1O95782 977 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 T-ENOLP0DO92 83 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 NEFHP12036 1026 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 BDNFP23560 247 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SLC8A1P32418 973 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SERPINB6P35237 376 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 LPIN1Q14693 890 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 DBN1Q16643 649 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 ATG16L1Q676U5 607 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 PACS1Q6VY07 963 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 C7orf26Q96N11 449 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 UROC1Q96N76 676 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 RAB3IPQ96QF0 476 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SLC13A1Q9BZW2 595 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TMLHEQ9NVH6 421 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 DCTN4Q9UJW0 460 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 INPP5FQ9Y2H2 1132 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 MTO1Q9Y2Z2 717 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 BIRC5O15392 142 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 DNAJC6O75061 913 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 CACNB2Q08289 660 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TUSC3Q13454 348 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 FRG1Q14331 258 aaKnown RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 KCNA10Q16322 511 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-202ENST00000457422 SPANXN3Q5MJ09 141 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 CLNKQ7Z7G1 428 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TAC4Q86UU9 113 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 ARMC2Q8NEN0 867 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 KLHDC9Q8NEP7 349 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TMEM209Q96SK2 561 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 VAT1Q99536 393 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TKTL2Q9H0I9 626 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 BAIAP2L1Q9UHR4 511 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 TRHDEQ9UKU6 1024 aa17.11■□□□□ 0.33
CCDC43-202ENST00000457422 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 IGLV3-25P01717 112 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 POLBP06746 335 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 SKIP12755 728 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 RASSF2P50749 326 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 ARFIP2P53365 341 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 PRKCZQ05513 592 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 OLIG2Q13516 323 aa17.1■□□□□ 0.33
CCDC43-202ENST00000457422 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
CCDC43-202ENST00000457422 KCTD11Q693B1 232 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms