RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMTC1Q8IUR5 882 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 TMEM139Q8IV31 216 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 ZNF683Q8IZ20 524 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 PRICKLE1Q96MT3 831 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 XPO6Q96QU8 1125 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 HAPLN3Q96S86 360 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 PNKPQ96T60 521 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 NUP85Q9BW27 656 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 MAGEB5Q9BZ81 275 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 IRF2BPLQ9H1B7 796 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 RBM12Q9NTZ6 932 aaKnown RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 DEC1Q9P2X7 70 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 PAXBP1Q9Y5B6 917 aa10.4□□□□□ -0.74
ATG4A-206ENST00000457035 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-206ENST00000457035 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 DRGXA6NNA5 263 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
ATG4A-206ENST00000457035 TBL1XO60907 577 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 KAT7O95251 611 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 TMEM253P0C7T8 217 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 PSMA2P25787 234 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 GRIA2P42262 883 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 GAS6Q14393 721 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 C10orf76Q5T2E6 689 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 LGI2Q8N0V4 545 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 CFAP52Q8N1V2 620 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 CCDC185Q8N715 623 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 IGSF8Q969P0 613 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 EXOC4Q96A65 974 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 NTAN1Q96AB6 310 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 LMLNQ96KR4 655 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 SLC2A11Q9BYW1 496 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 OSBPL2Q9H1P3 480 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 ARHGEF4Q9NR80 690 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 DNAJC17Q9NVM6 304 aaKnown RBP10.39□□□□□ -0.75
ATG4A-206ENST00000457035 HCN2Q9UL51 889 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 INTUQ9ULD6 942 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 SLC27A6Q9Y2P4 619 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 SNX10Q9Y5X0 201 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
ATG4A-206ENST00000457035 TBC1D3BA6NDS4 549 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 EIF3CLB5ME19 914 aaKnown RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 PRRT4C9JH25 899 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 F5H5T6 163 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 NDUFA10O95299 355 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 APODP05090 189 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 HLA-FP30511 346 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 GGCXP38435 758 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 MAGEA1P43355 309 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 MAGEA9P43362 315 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 TNFRSF4P43489 277 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 KIR2DL1P43626 348 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 DGKGP49619 791 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 NRG1Q02297 640 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 SCAPQ12770 1279 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 ACAP1Q15027 740 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 TCEAL1Q15170 157 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 ARL13BQ3SXY8 428 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 FBXO43Q4G163 708 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 PREPLQ4J6C6 727 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 EMC10Q5UCC4 262 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 GRAMD4Q6IC98 578 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 KIAA0907Q7Z7F0 614 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 SLFN11Q7Z7L1 901 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 CHSY1Q86X52 802 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 TERB1Q8NA31 727 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 HJURPQ8NCD3 748 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 FIBINQ8TAL6 211 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 SLC35G2Q8TBE7 412 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 WFDC5Q8TCV5 224 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 CTNNBL1Q8WYA6 563 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 BTBD6Q96KE9 485 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 EIF3CQ99613 913 aaKnown RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 BAG1Q99933 345 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-206ENST00000457035 CHRDQ9H2X0 955 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 STIM2Q9P246 746 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 UVRAGQ9P2Y5 699 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 OR12D3Q9UGF7 316 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 VANGL2Q9ULK5 521 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 FZD10Q9ULW2 581 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 STARD13Q9Y3M8 1113 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 PCDHA13Q9Y5I0 950 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 FANCMQ8IYD8 2048 aa10.38□□□□□ -0.75
ATG4A-206ENST00000457035 IGLV3-10A0A075B6K4 115 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 E9PAM4 449 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 FAM72CH0Y354 149 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 MYO1FO00160 1098 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 RNF40O75150 1001 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 LRCH4O75427 683 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 RNF8O76064 485 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 CNTN5O94779 1100 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 DMDP11532 3685 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 MIPP30301 263 aa10.37□□□□□ -0.75
ATG4A-206ENST00000457035 PCK1P35558 622 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms