RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GATA6Q92908 595 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 ALKBH8Q96BT7 664 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 SNRNP25Q9BV90 132 aaKnown RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
LINC00959-201ENST00000456581 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
LINC00959-201ENST00000456581 CASTOR2A6NHX0 329 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 KCNE1P15382 129 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 SDC4P31431 198 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 ARRB2P32121 409 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 PDE1BQ01064 536 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 HACE1Q8IYU2 909 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.36
LINC00959-201ENST00000456581 AGR3Q8TD06 166 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 ATXN7L3BQ96GX2 97 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 KATNAL1Q9BW62 490 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 EBF3Q9H4W6 596 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 CYP4F11Q9HBI6 524 aa12.77□□□□□ -0.36
LINC00959-201ENST00000456581 STX18Q9P2W9 335 aaKnown RBP12.77□□□□□ -0.36
LINC00959-201ENST00000456581 HUS1O60921 280 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ZBED1O96006 694 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 CD4P01730 458 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 AXLP30530 894 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ABCG1P45844 678 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 CLCNKBP51801 687 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 EPHB1P54762 984 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 OCRLQ01968 901 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 CACNB2Q08289 660 aaPredicted RBP12.77□□□□□ -0.37
LINC00959-201ENST00000456581 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.37
LINC00959-201ENST00000456581 XKR4Q5GH76 650 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 C1orf146Q5VVC0 180 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ZNF534Q76KX8 674 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 HASPINQ8TF76 798 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
LINC00959-201ENST00000456581 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ETNK2Q9NVF9 386 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 ZNF358Q9NW07 568 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 PLA2G4CQ9UP65 541 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 LRCH1Q9Y2L9 728 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 PSAT1Q9Y617 370 aa12.77□□□□□ -0.37
LINC00959-201ENST00000456581 MGEA5O60502 916 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 OR6B1O95007 311 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 SCNN1GP51170 649 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 AP1B1Q10567 949 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 FAM219BQ5XKK7 198 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 CWF19L1Q69YN2 538 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PAQR9Q6ZVX9 377 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PIGZQ86VD9 579 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 B3GALNT2Q8NCR0 500 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 RHOBTB2Q9BYZ6 727 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 MYOCOSA0A1B0GUC4 107 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 MAP3K7O43318 606 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 KRT34O76011 436 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 SNUPNO95149 360 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 ASGR1P07306 291 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 SNRPAP09012 282 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 ANPEPP15144 967 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 CD52P31358 61 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 MSX2P35548 267 aaPredicted RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 GRIA2P42262 883 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 BCAR1P56945 870 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 ADIGQ0VDE8 80 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 CASC4Q6P4E1 433 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 CRYBG2Q8N1P7 616 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 MTG1Q9BT17 334 aaPredicted RBP12.76□□□□□ -0.37
LINC00959-201ENST00000456581 RSAD1Q9HA92 442 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 PCDH18Q9HCL0 1135 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
LINC00959-201ENST00000456581 ARHGAP42A6NI28 874 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 F8W810 466 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ENDOD1O94919 500 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 THPOP40225 353 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 KRT72Q14CN4 511 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ARHGAP17Q68EM7 881 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 IRGCQ6NXR0 463 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 HFE2Q6ZVN8 426 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 FAM131BQ86XD5 332 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 PPP1R36Q96LQ0 422 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
LINC00959-201ENST00000456581 SH3GL3Q99963 347 aa12.75□□□□□ -0.37
LINC00959-201ENST00000456581 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms