RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 ZSWIM1Q9BR11 485 aa12.87□□□□□ -0.35
TRA2B-206ENST00000456380 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-206ENST00000456380 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
TRA2B-206ENST00000456380 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
TRA2B-206ENST00000456380 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
TRA2B-206ENST00000456380 ATMQ13315 3056 aa12.87□□□□□ -0.35
TRA2B-206ENST00000456380 A0A087WV48 116 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1B0GTQ1 180 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1W2PPC4 97 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SIN3BO75182 1162 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 WNT1P04628 370 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 CSKP41240 450 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 PRCPP42785 496 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 TBX4P57082 545 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 YWHAEP62258 255 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 C9orf64Q5T6V5 341 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 NUGGCQ68CJ6 796 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 MFN1Q8IWA4 741 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 GANCQ8TET4 914 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 IRGQQ8WZA9 623 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 AZIN2Q96A70 460 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 CRELD1Q96HD1 420 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1W2PP55 124 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 MID1O15344 667 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 DFNA5O60443 496 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 LTFP02788 710 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 FYNP06241 537 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 CTSOP43234 321 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 C21orf59P57076 290 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ST8SIA6P61647 398 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 KCNJ12Q14500 433 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SHBQ15464 509 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 CST6Q15828 149 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 FSCBQ5H9T9 825 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 GATAD2AQ86YP4 633 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SCUBE3Q8IX30 993 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ENGASEQ8NFI3 743 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 SLC35C1Q96A29 364 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 ELF4Q99607 663 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-206ENST00000456380 FTSJ1Q9UET6 329 aa12.86□□□□□ -0.35
TRA2B-206ENST00000456380 CBX4O00257 560 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 WNT9AO14904 365 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 RNASEH1O60930 286 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CALCAP01258 141 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 ASLP04424 464 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 PAEPP09466 180 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CLDN6P56747 220 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 PNOCQ13519 176 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CNGA2Q16280 664 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 INAVAQ3KP66 663 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 TMPRSS12Q86WS5 348 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 MMAAQ8IVH4 418 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CFAP52Q8N1V2 620 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CARNMT1Q8N4J0 409 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 KDM1BQ8NB78 822 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 HJURPQ8NCD3 748 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 FCRL2Q96LA5 508 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 FAM129BQ96TA1 746 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 FLNBO75369 2602 aaKnown RBP12.85□□□□□ -0.35
TRA2B-206ENST00000456380 CFAP46Q8IYW2 2715 aa12.85□□□□□ -0.35
TRA2B-206ENST00000456380 A0A1W2PR77 199 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 TTC34A8MYJ7 566 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 M0QYV0 167 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 PLK4O00444 970 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 RNASEH2AO75792 299 aaKnown RBP12.84□□□□□ -0.35
TRA2B-206ENST00000456380 SLC8A1P32418 973 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 OR2T34Q8NGX1 318 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 SAP25Q8TEE9 199 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 KAT5Q92993 513 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 SLC39A13Q96H72 371 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 HSFY1Q96LI6 401 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 MIS12Q9H081 205 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-206ENST00000456380 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 SLCO3A1Q9UIG8 710 aa12.84□□□□□ -0.35
TRA2B-206ENST00000456380 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms