RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GIMAP2Q9UG22 337 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CDH7Q9ULB5 785 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SMG5Q9UPR3 1016 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIM77I1YAP6 450 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 AIM2O14862 343 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CST8O60676 142 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TCF3P15923 654 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GLDCP23378 1020 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CXCR2P25025 360 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TKTP29401 623 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MAPK4P31152 587 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 APLP1P51693 650 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NEK2P51955 445 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GTF2IP78347 998 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PRAMEP78395 509 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TMPRSS15P98073 1019 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP2R5EQ16537 467 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GPR107Q5VW38 600 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ACAD10Q6JQN1 1059 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GLRX5Q86SX6 157 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ST13P4Q8IZP2 240 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PARP8Q8N3A8 854 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MYCT1Q8N699 235 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 RPL3LQ92901 407 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 EME1Q96AY2 570 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GPR78Q96P69 363 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 BTBD9Q96Q07 612 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 APBA2Q99767 749 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 C1orf21Q9H246 121 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NANOGQ9H9S0 305 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CXorf21Q9HAI6 301 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 LUC7LQ9NQ29 371 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PAK1IP1Q9NWT1 392 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 IGSF9Q9P2J2 1179 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CIDEBQ9UHD4 219 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MFHAS1Q9Y4C4 1052 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CPQQ9Y646 472 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 F5P12259 2224 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 LOXHD1Q8IVV2 1947 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM47E-STBD1D6RA91 191 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 AURKAO14965 403 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TPST1O60507 370 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 XYLBO75191 536 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 H6PDO95479 791 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 VNN1O95497 513 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PRKCAP17252 672 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 OXTRP30559 389 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RARRES1P49788 294 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ATXN1P54253 815 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TXNL4AP83876 142 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PTK7Q13308 1070 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ORC1Q13415 861 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 HIF1AQ16665 826 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 USH1GQ495M9 461 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC152Q4G0S7 254 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PLEKHA7Q6IQ23 1121 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC16A12Q6ZSM3 486 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 WDR75Q8IWA0 830 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PCDH20Q8N6Y1 951 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TSPAN14Q8NG11 270 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ELMO1Q92556 727 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RCN3Q96D15 328 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 C2orf40Q9H1Z8 148 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF385DQ9H6B1 395 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SPON1Q9HCB6 807 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GTSE1Q9NYZ3 720 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 UGT2A1Q9Y4X1 527 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 DOCK8Q8NF50 2099 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP8B3O60423 1300 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 DDTLA6NHG4 134 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 C9IYK1 514 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 AKAP10O43572 662 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 LPXNO60711 386 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 IDO1P14902 403 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMC2P35998 433 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 KCNC1P48547 511 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RPS8P62241 208 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NFATC3Q12968 1075 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 IRF3Q14653 427 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PLCL1Q15111 1095 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 MPPE1Q53F39 396 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SH2D4BQ5SQS7 431 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM182BQ5T319 152 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 C16orf87Q6PH81 154 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 LPCAT2Q7L5N7 544 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PATL1Q86TB9 770 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GALNT13Q8IUC8 556 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 FUNDC1Q8IVP5 155 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 C10orf107Q8IVU9 208 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM178BQ8IXR5 827 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 HS3ST5Q8IZT8 346 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NATD1Q8N6N6 113 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ARNTL2Q8WYA1 636 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TFAP2CQ92754 450 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NLRP4Q96MN2 994 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TWNKQ96RR1 684 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CENPKQ9BS16 269 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 EHD1Q9H4M9 534 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 STK39Q9UEW8 545 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PARP2Q9UGN5 583 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms