RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CDH5P33151 784 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 NOS2P35228 1153 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 CSKP41240 450 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TPMTP51580 245 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 COPAP53621 1224 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 NME3Q13232 169 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 PTPRNQ16849 979 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 WDR45BQ5MNZ6 344 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 PEAR1Q5VY43 1037 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 ERICH1Q86X53 443 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 CACUL1Q86Y37 369 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 SLC41A1Q8IVJ1 513 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF366Q8N895 744 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TTC17Q96AE7 1141 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 C18orf8Q96DM3 657 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 MYEOVQ96EZ4 313 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TOE1Q96GM8 510 aaKnown RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 NUP58Q9BVL2 599 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 CD93Q9NPY3 652 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 FAM207AQ9NSI2 230 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM74BQ9NUR3 256 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM51Q9NW97 253 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 WSB2Q9NYS7 404 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.642e-7■■■□□ 15.3
DDX39A-203ENST00000454233 SUSD2Q9UGT4 822 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 STAP1Q9ULZ2 295 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 MEI4A8MW99 385 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 M0QYT0 321 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 TM4SF5O14894 197 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GFPT2O94808 682 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 F9P00740 461 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 SERPINF2P08697 491 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GNSP15586 552 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 SCNN1AP37088 669 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 MATKP42679 507 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GABRB2P47870 512 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 COPB1P53618 953 aaKnown RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 OXCT1P55809 520 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 POLR2FP61218 127 aaKnown RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GFPT1Q06210 699 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 EIF4EBP2Q13542 120 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 SLC12A1Q13621 1099 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 PITRM1Q5JRX3 1037 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 FAM102AQ5T9C2 384 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 SLC23A3Q6PIS1 610 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 NOP9Q86U38 636 aaKnown RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF677Q86XU0 584 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 KDM1BQ8NB78 822 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 CADM4Q8NFZ8 388 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 EPS8L1Q8TE68 723 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF419Q96HQ0 510 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 LMLNQ96KR4 655 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 RPRD1AQ96P16 312 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GPR174Q9BXC1 333 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 GANQ9H2C0 597 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 PRSS16Q9NQE7 514 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
DDX39A-203ENST00000454233 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
DDX39A-203ENST00000454233 CEP192Q8TEP8 1941 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 TNRC6BQ9UPQ9 1833 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 A0A1B0GVM2 712 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 TCAF2A6NFQ2 919 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 RNASEH1O60930 286 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 DNTTP04053 509 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 SRPRAP08240 638 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 MMEP08473 750 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 ENGP17813 658 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 SOX5P35711 763 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 NNMTP40261 264 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 STAT1P42224 750 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 MAPK8P45983 427 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 KLK7P49862 253 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 SULT1E1P49888 294 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 ZBTB16Q05516 673 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 SYCP1Q15431 976 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 UAP1L1Q3KQV9 507 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 PLEKHG6Q3KR16 790 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 FSCBQ5H9T9 825 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 BRMS1LQ5PSV4 323 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 NAA35Q5VZE5 725 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF776Q68DI1 518 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 MMS22LQ6ZRQ5 1243 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 FAM124AQ86V42 546 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 XYLT1Q86Y38 959 aa11.03□□□□□ -0.64
DDX39A-203ENST00000454233 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
DDX39A-203ENST00000454233 NEK11Q8NG66 645 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms