RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NUDT16L1Q9BRJ7 211 aaKnown RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PHF7Q9BWX1 381 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 RMI1Q9H9A7 625 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 SLC2A4RGQ9NR83 387 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 SMYD2Q9NRG4 433 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 SLC22A11Q9NSA0 550 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 ABHD10Q9NUJ1 306 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 FZD4Q9ULV1 537 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PCDHB2Q9Y5E7 798 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 CYP46A1Q9Y6A2 500 aa4.17□□□□□ -1.74
HMGB1P15-201ENST00000453854 PBRM1Q86U86 1689 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 FNDC1Q4ZHG4 1894 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 DIP2BQ9P265 1576 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3DA0A087WVF3 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3IA0A087WXS9 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 A0A087X0M5 115 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3EA0A087X179 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3KA0A087X1G2 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 A0A1B0GX30 115 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CCDC151A5D8V7 595 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3BA6NDS4 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3FA6NER0 549 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 C3orf70A6NLC5 250 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3LB9A6J9 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 H0YIZ8 118 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CES2O00748 559 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 DHX16O60231 1041 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 PRAMEF2O60811 474 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3HP0C7X1 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TNNT1P13805 278 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 SFPQP23246 707 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CYP2C18P33260 490 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 GALNSP34059 522 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 GRK5P34947 590 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 MPLP40238 635 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 GRIA3P42263 894 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 GDF5P43026 501 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 PCP4P48539 62 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CCT4P50991 539 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CASP6P55212 293 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TAS2R50P59544 299 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 DGCR2P98153 550 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CFHR3Q02985 330 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 KLF10Q13118 480 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 FOXE3Q13461 319 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 THOC5Q13769 683 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 PRICKLE4Q2TBC4 344 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LRRC24Q50LG9 513 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 RNASE12Q5GAN4 147 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TMEM63BQ5T3F8 832 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LIPMQ5VYY2 423 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3GQ6DHY5 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3CQ6IPX1 549 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 WDR93Q6P2C0 686 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 NEK10Q6ZWH5 1172 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LRRC8DQ7L1W4 858 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LAS2Q8IYD9 372 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D3Q8IZP1 549 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LSMEM1Q8N8F7 131 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LSM14AQ8ND56 463 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ABHD11Q8NFV4 315 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CLEC4CQ8WTT0 213 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CENPIQ92674 756 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZUFSPQ96AP4 578 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ARRDC3Q96B67 414 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 FUZQ9BT04 418 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ELOVL1Q9BW60 279 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 MRIQ9BWK5 157 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 RNF26Q9BY78 433 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 LMAN2LQ9H0V9 348 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 PLEKHA5Q9HAU0 1116 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 IL21RQ9HBE5 538 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 CD207Q9UJ71 328 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ING1Q9UK53 422 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 HSF4Q9ULV5 492 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 ADAMTS5Q9UNA0 930 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 TARBP1Q13395 1621 aaKnown RBP4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 SYNJ2O15056 1496 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 SPATA31A1Q5TZJ5 1347 aa4.16□□□□□ -1.74
HMGB1P15-201ENST00000453854 FZD7O75084 574 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 ESRRBO95718 433 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 C1RP00736 705 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 HNRNPCP07910 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 ELFN1P0C7U0 828 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 HKR1P10072 659 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 PEPDP12955 493 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 APEHP13798 732 aaKnown RBP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 CPA1P15085 419 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 ATF7P17544 494 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 ADRA1BP35368 520 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 HOXD12P35452 270 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 JAK3P52333 1124 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 HMGA2P52926 109 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 KRT83P78385 493 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 ROR1Q01973 937 aa4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 RNASELQ05823 741 aaKnown RBP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 TBL3Q12788 808 aaKnown RBP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 AARS2Q5JTZ9 985 aaKnown RBP4.15□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPATCH4Q5T3I0 446 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms