RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NFIXQ14938 502 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 KIR3DS1Q14943 382 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 MEP1BQ16820 701 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC5A9Q2M3M2 681 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 PROSER3Q2NL68 480 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 MYLK3Q32MK0 819 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZRANB3Q5FWF4 1079 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 LIPMQ5VYY2 423 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ATG14Q6ZNE5 492 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 MSANTD1Q6ZTZ1 278 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 PTCHD4Q6ZW05 846 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 CHST9Q7L1S5 443 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 HOOK3Q86VS8 718 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 RASGRP3Q8IV61 690 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM151BQ8IW70 566 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 PDCL2Q8N4E4 241 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARRDC4Q8NCT1 418 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 NLGN2Q8NFZ4 835 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 OR56A3Q8NH54 315 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZCCHC10Q8TBK6 192 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUN5Q8TC36 379 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 AGR3Q8TD06 166 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GAB3Q8WWW8 586 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 DDX17Q92841 729 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 LRRC59Q96AG4 307 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SAAL1Q96ER3 474 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 RBM17Q96I25 401 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GBP4Q96PP9 640 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 JMJD8Q96S16 334 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 LZTS2Q9BRK4 669 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TBCDQ9BTW9 1192 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GCOM2Q9BZD3 368 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ISCUQ9H1K1 167 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 EPB41L1Q9H4G0 881 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 GALNT8Q9NY28 637 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARHGAP20Q9P2F6 1191 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 IMPACTQ9P2X3 320 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEC63Q9UGP8 760 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 AJAP1Q9UKB5 411 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 APPL1Q9UKG1 709 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 SARDHQ9UL12 918 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 RPH3AQ9Y2J0 694 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 MED16Q9Y2X0 877 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 NOSIPQ9Y314 301 aaKnown RBP4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZNF804BA4D1E1 1349 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 NSD2O96028 1365 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM94Q12767 1356 aa4.63□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRBC2A0A5B9 178 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 LRRC72A6NJI9 287 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SAC3D1A6NKF1 404 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 OR6C76A6NM76 312 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 EFCAB8A8MWE9 144 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAB27BO00194 218 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 NFIBO00712 420 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 BCAT2O15382 392 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TULP3O75386 442 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 IPO7O95373 1038 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 C22orf31O95567 290 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 NTSR2O95665 410 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ALPPP05187 535 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 GJB1P08034 283 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ANXA6P08133 673 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRR35P0CG20 571 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MED14OSP0DP75 135 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ALPPL2P10696 532 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRKCAP17252 672 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 KRT4P19013 534 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 GLDCP23378 1020 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRKCHP24723 683 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRDX5P30044 214 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 AVPR2P30518 371 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MSX2P35548 267 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARL4AP40617 200 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 EPS15P42566 896 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCR10P46092 362 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 BMXP51813 675 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 GBX2P52951 348 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 RPL7AP62424 266 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRAMEP78395 509 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC6A3Q01959 620 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TLE1Q04724 770 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 RNASELQ05823 741 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CHRNA2Q15822 529 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZNF484Q5JVG2 852 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TEX35Q5T0J7 233 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCDC122Q5T0U0 273 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 UTP14CQ5TAP6 766 aaKnown RBP4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 DCAF12L1Q5VU92 463 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 CES4AQ5XG92 561 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 BTBD8Q5XKL5 378 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLFN12LQ6IEE8 588 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZCCHC12Q6PEW1 402 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 NCEH1Q6PIU2 408 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM270Q6UE05 265 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZYG11AQ6WRX3 759 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 SYNE3Q6ZMZ3 975 aa4.62□□□□□ -1.67
HMGB3P21-201ENST00000452483 MIER3Q7Z3K6 550 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms