RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 C10orf67Q8IYJ2 551 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 FAM149B1Q96BN6 582 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 TRABDQ9H4I3 376 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 RCOR3Q9P2K3 495 aaPredicted RBP11.05□□□□□ -0.64
PKP4-206ENST00000452162 TIMM13Q9Y5L4 95 aaPredicted RBP11.05□□□□□ -0.64
PKP4-206ENST00000452162 TEX264Q9Y6I9 313 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 FAM47DPA6NHR8 397 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 PRPF4O43172 522 aaKnown RBP eCLIP11.05□□□□□ -0.643e-19■■□□□ 13.9
PKP4-206ENST00000452162 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
PKP4-206ENST00000452162 VIMP08670 466 aaKnown RBP11.05□□□□□ -0.64
PKP4-206ENST00000452162 ELK3P41970 407 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 MAP3K7CLP57077 242 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 MTM1Q13496 603 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 C4orf22Q6V702 233 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 C3orf62Q6ZUJ4 267 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 HFE2Q6ZVN8 426 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 SIX6OS1Q8N1H7 587 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 PYROXD2Q8N2H3 581 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.64
PKP4-206ENST00000452162 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 FBF1Q8TES7 1133 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 DYDC1Q8WWB3 177 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 PPP2R3CQ969Q6 453 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 OLFM3Q96PB7 478 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 KLHL5Q96PQ7 755 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 SMOQ99835 787 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 MLXIPLQ9NP71 852 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 ETNK2Q9NVF9 386 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 NKIRAS1Q9NYS0 192 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 SENP1Q9P0U3 644 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 CHMP2BQ9UQN3 213 aa11.05□□□□□ -0.64
PKP4-206ENST00000452162 MYBPHLA2RUH7 354 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 TCP11X1B4DZS4 312 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 M0QZQ0 153 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 TEX28O15482 410 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 GCATO75600 419 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 GLP2RO95838 553 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 GOT1P17174 413 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 AMPD1P23109 780 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 TKTL1P51854 596 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 SLC18A1P54219 525 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 DLX2Q07687 328 aaPredicted RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 PSMD5Q16401 504 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 KLHL38Q2WGJ6 581 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 RSPO2Q6UXX9 243 aaPredicted RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 DSTYKQ6XUX3 929 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ARHGEF18Q6ZSZ5 1173 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 PALM2Q8IXS6 379 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 OTUD6BQ8N6M0 293 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ZMIZ2Q8NF64 920 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CCDC110Q8TBZ0 833 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 DENND1AQ8TEH3 1009 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 PCED1BQ96HM7 432 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CABS1Q96KC9 395 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 FRMD8Q9BZ67 464 aaPredicted RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 KIF9Q9HAQ2 790 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 PRDM16Q9HAZ2 1276 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 RXFP1Q9HBX9 757 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CLDND1Q9NY35 253 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 DTLQ9NZJ0 730 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CDH9Q9ULB4 789 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 MFHAS1Q9Y4C4 1052 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 SYN3O14994 580 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ADAM12O43184 909 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 AP1G2O75843 785 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 FBXO21O94952 628 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 OAS1P00973 400 aaKnown RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 FYNP06241 537 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 LTBRP36941 435 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 DAOAP59103 153 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 KCNC3Q14003 757 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ITIH4Q14624 930 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
PKP4-206ENST00000452162 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 FAXCQ5TGI0 409 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 SYPL2Q5VXT5 272 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 GPRIN1Q7Z2K8 1008 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 EFHBQ8N7U6 833 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 GDAP1Q8TB36 358 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 MZB1Q8WU39 189 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 DCAKDQ8WVC6 231 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 SGSM3Q96HU1 749 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 PAFAH2Q99487 392 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 CLSTN3Q9BQT9 956 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 EMILIN2Q9BXX0 1053 aa11.04□□□□□ -0.64
PKP4-206ENST00000452162 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms