RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 KLHDC7AQ5VTJ3 777 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 OTUD1Q5VV17 481 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 MMS22LQ6ZRQ5 1243 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CHSY1Q86X52 802 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 LGI2Q8N0V4 545 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 GPT2Q8TD30 523 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 MRGPRX3Q96LB0 322 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CNTNAP3BQ96NU0 1288 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CNTNAP3Q9BZ76 1288 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 FAM204AQ9H8W3 233 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 FBRSQ9HAH7 460 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 PLCB1Q9NQ66 1216 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 PRSS16Q9NQE7 514 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 DDIT4Q9NX09 232 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 USP24Q9UPU5 2620 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ARHGAP33O14559 1287 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 DAB1O75553 588 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ASLP04424 464 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 SLC2A3P11169 496 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ACADMP11310 421 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 UCHL3P15374 230 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 CYP11B1P15538 503 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 MAOBP27338 520 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 CCR1P32246 355 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 CDH5P33151 784 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-208ENST00000452047 BPIFB4P59827 614 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 RPS14P62263 151 aaKnown RBP12.9□□□□□ -0.34
CPSF4-208ENST00000452047 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 RAPGEF1Q13905 1077 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ARID5BQ14865 1188 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 PITRM1Q5JRX3 1037 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 WDR45BQ5MNZ6 344 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 CDKAL1Q5VV42 579 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ATP6V0D2Q8N8Y2 350 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 KDM1BQ8NB78 822 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ZNF397Q8NF99 534 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ENOX1Q8TC92 643 aaKnown RBP12.9□□□□□ -0.34
CPSF4-208ENST00000452047 NUP58Q9BVL2 599 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 MTG2Q9H4K7 406 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 SUSD2Q9UGT4 822 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
CPSF4-208ENST00000452047 PCNX2A6NKB5 2137 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 METTL12A8MUP2 240 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 MEI4A8MW99 385 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 UPK3BL1B0FP48 263 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 UPK3BL2E5RIL1 263 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 F5H5T6 163 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 F8VZ95 297 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 PES1O00541 588 aaKnown RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 GJB3O75712 270 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 CEACAM1P13688 526 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ACSL1P33121 698 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 NOS2P35228 1153 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 CTSOP43234 321 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 GABRB2P47870 512 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 SHC2P98077 582 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ZBTB16Q05516 673 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 HNRNPA1L2Q32P51 320 aaKnown RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 PIP4P1Q86T03 277 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 FAM124AQ86V42 546 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 CIR1Q86X95 450 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 TMEM35BQ8NCS4 154 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 OR2I1PQ8NGU4 316 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 RSPH9Q9H1X1 276 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 DNAAF2Q9NVR5 837 aaKnown RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 KIAA1522Q9P206 1035 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-208ENST00000452047 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ZFHX4Q86UP3 3567 aa12.89□□□□□ -0.35
CPSF4-208ENST00000452047 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ZZEF1O43149 2961 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 A0A1B0GVM2 712 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 TCAF2A6NFQ2 919 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 H0Y626 953 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SIN3BO75182 1162 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SYPP08247 313 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 GNSP15586 552 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms