RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GPT2Q8TD30 523 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 CEP192Q8TEP8 1941 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 NUP58Q9BVL2 599 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 GTPBP2Q9BX10 602 aaKnown RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 GPR174Q9BXC1 333 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 FBRSQ9HAH7 460 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 KIAA1522Q9P206 1035 aaPredicted RBP15.81■□□□□ 0.12
CHD3-205ENST00000449744 SUSD2Q9UGT4 822 aa15.81■□□□□ 0.12
CHD3-205ENST00000449744 DAB1O75553 588 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 KCNK5O95279 499 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 SERPINF2P08697 491 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 UCHL3P15374 230 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 CYP11B1P15538 503 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 NOS2P35228 1153 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 CSKP41240 450 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 NME3Q13232 169 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 MTA1Q13330 715 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 RABGAP1LQ5R372 815 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 DPY19L2P1Q6NXN4 242 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 SLC26A9Q7LBE3 791 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 CADM4Q8NFZ8 388 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 TTC17Q96AE7 1141 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 STK33Q9BYT3 514 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 VPS16Q9H269 839 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 ACACBO00763 2458 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 DNAH14Q0VDD8 3507 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 CKAP5Q14008 2032 aa15.8■□□□□ 0.12
CHD3-205ENST00000449744 DNTTP04053 509 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 SYPP08247 313 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 MAOBP27338 520 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 NOVA1P51513 510 aaKnown RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 EIF4EBP2Q13542 120 aaPredicted RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 FSCBQ5H9T9 825 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 PITRM1Q5JRX3 1037 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 TAF3Q5VWG9 929 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 RNF219Q5W0B1 726 aaPredicted RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 PSAPL1Q6NUJ1 521 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 MMS22LQ6ZRQ5 1243 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 FAM124AQ86V42 546 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 ERICH1Q86X53 443 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 MSANTD4Q8NCY6 345 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 LMLNQ96KR4 655 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 NAA15Q9BXJ9 866 aaKnown RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 PRSS16Q9NQE7 514 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 FSCN3Q9NQT6 498 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 ANO10Q9NW15 660 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 RRN3Q9NYV6 651 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 INTS6Q9UL03 887 aaKnown RBP15.79■□□□□ 0.12
CHD3-205ENST00000449744 STAP1Q9ULZ2 295 aa15.79■□□□□ 0.12
CHD3-205ENST00000449744 F8VZ95 297 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 M0QYT0 321 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 IGLV3-19P01714 112 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 RNASE9P60153 205 aaKnown RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 ZBTB16Q05516 673 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 KRT31Q15323 416 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 PLEKHG6Q3KR16 790 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 TTC31Q49AM3 519 aaPredicted RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 N4BP2L1Q5TBK1 243 aaPredicted RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 TTC39BQ5VTQ0 682 aaPredicted RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 DCAF12L1Q5VU92 463 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 CDKAL1Q5VV42 579 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 ZNF776Q68DI1 518 aaPredicted RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 RBM43Q6ZSC3 357 aaKnown RBP15.78■□□□□ 0.12
CHD3-205ENST00000449744 SND1Q7KZF4 910 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHD3-205ENST00000449744 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 MIR1-1HGQ9H1L0 117 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 CAPN10Q9HC96 672 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHD3-205ENST00000449744 ERVW-1Q9UQF0 538 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 GON4LQ3T8J9 2241 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 EPG5Q9HCE0 2579 aa15.78■□□□□ 0.12
CHD3-205ENST00000449744 MUC22E2RYF6 1773 aaPredicted RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 A0A1B0GVM2 712 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 TCAF2A6NFQ2 919 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 METTL12A8MUP2 240 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 ARHGAP33O14559 1287 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 RNASEH1O60930 286 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 SRPRAP08240 638 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 CSRP1P21291 193 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 CDH5P33151 784 aaPredicted RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 NNMTP40261 264 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 MATKP42679 507 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 SULT1E1P49888 294 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 OXCT1P55809 520 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 RPS14P62263 151 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 ECT2LQ008S8 904 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 SLC12A1Q13621 1099 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 STX1AQ16623 288 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 FAM102AQ5T9C2 384 aaPredicted RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 SH3PXD2AQ5TCZ1 1133 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 NOP9Q86U38 636 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 CCAR2Q8N163 923 aaKnown RBP15.77■□□□□ 0.12
CHD3-205ENST00000449744 KDM1BQ8NB78 822 aa15.77■□□□□ 0.12
CHD3-205ENST00000449744 GANCQ8TET4 914 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms