RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 COL25A1Q9BXS0 654 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 PLK2Q9NYY3 685 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 HBS1LQ9Y450 684 aaKnown RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 VPS13AQ96RL7 3174 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ANTXRLA6NF34 631 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CHADO15335 359 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 MYBL1P10243 752 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CD72P21854 359 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 PTPN9P43378 593 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CLNS1AP54105 237 aaKnown RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 MESP2Q0VG99 397 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 GAB4Q2WGN9 574 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 FAM133BQ5BKY9 247 aaKnown RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 RNF187Q5TA31 235 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 RHBDF2Q6PJF5 856 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 TPGS1Q6ZTW0 290 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 YAF2Q8IY57 180 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CCDC185Q8N715 623 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ZNF564Q8TBZ8 553 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 DEPDC1BQ8WUY9 529 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CTNNBL1Q8WYA6 563 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CENPIQ92674 756 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 PLD4Q96BZ4 506 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 BATF3Q9NR55 127 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CTTNBP2NLQ9P2B4 639 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ANAPC7Q9UJX3 599 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 DUSP12Q9UNI6 340 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ZDBF2Q9HCK1 2354 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KCNU1A8MYU2 1149 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TRIM24O15164 1050 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TSPAN3O60637 253 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 ENDOD1O94919 500 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CYP17A1P05093 508 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 SRFP11831 508 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PSMA2P25787 234 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CXCR3P49682 368 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 NNTQ13423 1086 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 ARTNQ5T4W7 220 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 EMC10Q5UCC4 262 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PIK3R6Q5UE93 754 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TXNRD3NBQ6F5E7 133 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PPP1R2P3Q6NXS1 205 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KDM7AQ6ZMT4 941 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 SND1Q7KZF4 910 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 RNF34Q969K3 372 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 NXPE3Q969Y0 559 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 E2F7Q96AV8 911 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TRIM11Q96F44 468 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PGAP3Q96FM1 320 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-203ENST00000449575 PEBP4Q96S96 227 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TRIM62Q9BVG3 475 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TKTL2Q9H0I9 626 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KLHL33A6NCF5 533 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 IFNAR2P48551 515 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KRT83P78385 493 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 RING1Q06587 406 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 RUNX3Q13761 415 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 SPA17Q15506 151 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 TXNDC11Q6PKC3 985 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CYP4V2Q6ZWL3 525 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KIAA1328Q86T90 577 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CCDC13Q8IYE1 715 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 MMGT1Q8N4V1 131 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 ARMC2Q8NEN0 867 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 WDCPQ9H6R7 721 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 ECT2Q9H8V3 914 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 MRPL47Q9HD33 250 aaKnown RBP10.18□□□□□ -0.78
CCDC171-203ENST00000449575 SLC40A1Q9NP59 571 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CA14Q9ULX7 337 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 CLEC4EQ9ULY5 219 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 GUCA1BQ9UMX6 200 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 HYOU1Q9Y4L1 999 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
CCDC171-203ENST00000449575 KRBA1A5PL33 1030 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 KRT86O43790 486 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PAGE1O75459 146 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 CCR1P32246 355 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 NUMBP49757 651 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 DHCR24Q15392 516 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 RAP1GAP2Q684P5 730 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 CCDC121Q6ZUS5 278 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 C14orf80Q86SX3 495 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 DDX42Q86XP3 938 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SFTPA1Q8IWL2 248 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PYROXD2Q8N2H3 581 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 ZNF473Q8WTR7 871 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 RSRC1Q96IZ7 334 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PRICKLE1Q96MT3 831 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SIK2Q9H0K1 926 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms