RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 PDE1BQ01064 536 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 NFIL3Q16649 462 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DENND1BQ6P3S1 775 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 PARM1Q6UWI2 310 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DQX1Q8TE96 717 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 IFT81Q8WYA0 676 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 EXOC2Q96KP1 924 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 NHEJ1Q9H9Q4 299 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 SMYD2Q9NRG4 433 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 NAALADL1Q9UQQ1 740 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ADAMTS3O15072 1205 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 PLEKP08567 350 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 HIST1H2AGP0C0S8 130 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 HLA-EP13747 358 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 HIST1H2ADP20671 130 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ITGALP20701 1170 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 COL9A1P20849 921 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 FNTBP49356 437 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ECT2LQ008S8 904 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TNK2Q07912 1038 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MGAT3Q09327 533 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 LAMB3Q13751 1172 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DLG2Q15700 870 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CFAP221Q4G0U5 840 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TRIM61Q5EBN2 209 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 C6orf163Q5TEZ5 329 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TMEM173Q86WV6 379 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 AHI1Q8N157 1196 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ALLCQ8N6M5 410 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 C4orf32Q8N8J7 132 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MSANTD3Q96H12 275 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 HIST1H2AHQ96KK5 128 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DCBLD2Q96PD2 775 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 HIST1H2AJQ99878 128 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 H2AFJQ9BTM1 129 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 UVRAGQ9P2Y5 699 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TRIM10Q9UDY6 481 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 UTP11Q9Y3A2 253 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 SHISA7A6NL88 538 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CILPO75339 1184 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 PIGRP01833 764 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 LMNAP02545 664 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 NOVA1P51513 510 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 BRMS1LQ5PSV4 323 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TTC39BQ5VTQ0 682 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 FRA10AC1Q70Z53 315 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 C12orf56Q8IXR9 622 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ELOA2Q8IYF1 753 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 TMEFF1Q8IYR6 380 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ZSCAN1Q8NBB4 408 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 C16orf45Q96MC5 204 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 DNAJC16Q9Y2G8 782 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 CTAGE15A4D2H0 777 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 FFAR2O15552 330 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 CTAGE8P0CG41 777 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 SLC8A1P32418 973 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MAGEA9P43362 315 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 TRIM71Q2Q1W2 868 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 KCNT1Q5JUK3 1230 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 KLHL35Q6PF15 583 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 NDRG1Q92597 394 aaKnown RBP8.68□□□□□ -1.02
HCG18-238ENST00000449544 SCYL1Q96KG9 808 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 PPP1R2P1Q96PQ5 205 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 EGFL8Q99944 293 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 HEPHQ9BQS7 1158 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 SPATA16Q9BXB7 569 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 ZCWPW1Q9H0M4 648 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 COMMD8Q9NX08 183 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 PKD2L2Q9NZM6 624 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 MPP6Q9NZW5 540 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 HACD3Q9P035 362 aa8.68□□□□□ -1.02
HCG18-238ENST00000449544 CACNA1BQ00975 2339 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 ADAM12O43184 909 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 GSTA1P08263 222 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 GSTA2P09210 222 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 DLDP09622 509 aaKnown RBP8.67□□□□□ -1.02
HCG18-238ENST00000449544 FAM163BP0C2L3 166 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 HNF1BP35680 557 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 NPY5RQ15761 445 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 AMZ1Q400G9 498 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 ASTLQ6HA08 431 aaPredicted RBP8.67□□□□□ -1.02
HCG18-238ENST00000449544 SLC8B1Q6J4K2 584 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 ACAD10Q6JQN1 1059 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 TRIM59Q8IWR1 403 aa8.67□□□□□ -1.02
HCG18-238ENST00000449544 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
HCG18-238ENST00000449544 VPS50Q96JG6 964 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms