RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 GRAP2O75791 330 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 CSKP41240 450 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 PITX1P78337 314 aaPredicted RBP20.38■□□□□ 0.85
VCP-203ENST00000448530 MTA1Q13330 715 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 PLEKHG6Q3KR16 790 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 SH3PXD2AQ5TCZ1 1133 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 FAM183BPQ6ZVS7 135 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 FAM124AQ86V42 546 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 TMEM35BQ8NCS4 154 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 TTC17Q96AE7 1141 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 MYEOVQ96EZ4 313 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 SLC2A13Q96QE2 648 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 CAPN10Q9HC96 672 aa20.38■□□□□ 0.85
VCP-203ENST00000448530 XPO7Q9UIA9 1087 aaKnown RBP20.38■□□□□ 0.85
VCP-203ENST00000448530 IGLV3-19P01714 112 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 DNTTP04053 509 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 ERBB2P04626 1255 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 SLC6A3Q01959 620 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 ZBTB16Q05516 673 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 NME3Q13232 169 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 TTC31Q49AM3 519 aaPredicted RBP20.37■□□□□ 0.85
VCP-203ENST00000448530 PITRM1Q5JRX3 1037 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 RABGAP1LQ5R372 815 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 KLHDC7AQ5VTJ3 777 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 RNF219Q5W0B1 726 aaPredicted RBP20.37■□□□□ 0.85
VCP-203ENST00000448530 ZDHHC17Q8IUH5 632 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 ENOX1Q8TC92 643 aaKnown RBP20.37■□□□□ 0.85
VCP-203ENST00000448530 MIR1-1HGQ9H1L0 117 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 PLCB1Q9NQ66 1216 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 PRSS16Q9NQE7 514 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 FSCN3Q9NQT6 498 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 TAB2Q9NYJ8 693 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 FHOD1Q9Y613 1164 aa20.37■□□□□ 0.85
VCP-203ENST00000448530 ARHGAP33O14559 1287 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 RNASEH1O60930 286 aaKnown RBP20.36■□□□□ 0.85
VCP-203ENST00000448530 DAB1O75553 588 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 CSRP1P21291 193 aaKnown RBP20.36■□□□□ 0.85
VCP-203ENST00000448530 MAOBP27338 520 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 KCNMA1Q12791 1236 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 PTPN20Q4JDL3 420 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 FSCBQ5H9T9 825 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 TTC39BQ5VTQ0 682 aaPredicted RBP20.36■□□□□ 0.85
VCP-203ENST00000448530 ZNF776Q68DI1 518 aaPredicted RBP20.36■□□□□ 0.85
VCP-203ENST00000448530 OLFML1Q6UWY5 402 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 SLC26A9Q7LBE3 791 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 LMLNQ96KR4 655 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 PCED1AQ9H1Q7 454 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 SLC32A1Q9H598 525 aa20.36■□□□□ 0.85
VCP-203ENST00000448530 ASCC3Q8N3C0 2202 aaKnown RBP20.36■□□□□ 0.85
VCP-203ENST00000448530 A0A1B0GTW7 788 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 METTL12A8MUP2 240 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 OPHN1O60890 802 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 SRPRAP08240 638 aaKnown RBP20.35■□□□□ 0.85
VCP-203ENST00000448530 CEACAM1P13688 526 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 UCHL3P15374 230 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 CYP11B1P15538 503 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 NOS2P35228 1153 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 OXCT1P55809 520 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 RPS14P62263 151 aaKnown RBP20.35■□□□□ 0.85
VCP-203ENST00000448530 SFSWAPQ12872 951 aaKnown RBP20.35■□□□□ 0.85
VCP-203ENST00000448530 SLC12A1Q13621 1099 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 DCAF12L1Q5VU92 463 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 SASS6Q6UVJ0 657 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 MMS22LQ6ZRQ5 1243 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 MINDY1Q8N5J2 469 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 KDM1BQ8NB78 822 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 MSANTD4Q8NCY6 345 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 GANCQ8TET4 914 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 DNASE2BQ8WZ79 361 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 RRN3Q9NYV6 651 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 ANGPTL2Q9UKU9 493 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 INTS6Q9UL03 887 aaKnown RBP20.35■□□□□ 0.85
VCP-203ENST00000448530 ERVW-1Q9UQF0 538 aa20.35■□□□□ 0.85
VCP-203ENST00000448530 M0QYT0 321 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 GIPC1O14908 333 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 NNMTP40261 264 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 RNASE9P60153 205 aaKnown RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 ECT2LQ008S8 904 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 ZNF252P-AS1Q0IIN9 211 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 EIF4EBP2Q13542 120 aaPredicted RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 HNRNPA1L2Q32P51 320 aaKnown RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 FKBP15Q5T1M5 1219 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 TAF3Q5VWG9 929 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 DPY19L2P1Q6NXN4 242 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 SND1Q7KZF4 910 aaKnown RBP eCLIP20.34■□□□□ 0.854e-7■■□□□ 11.7
VCP-203ENST00000448530 ERICH1Q86X53 443 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 DEFB124Q8NES8 71 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 ZNF397Q8NF99 534 aaPredicted RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 SNX19Q92543 992 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 C18orf8Q96DM3 657 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 CNTNAP3BQ96NU0 1288 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 RPRD1AQ96P16 312 aaPredicted RBP20.34■□□□□ 0.85
VCP-203ENST00000448530 PPP1R9BQ96SB3 815 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 STK33Q9BYT3 514 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 CNTNAP3Q9BZ76 1288 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 BTBD1Q9H0C5 482 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 VPS16Q9H269 839 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 STAP1Q9ULZ2 295 aa20.34■□□□□ 0.85
VCP-203ENST00000448530 NCKAP1Q9Y2A7 1128 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms